RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SNX9Q9Y5X1 595 aa25.44■■□□□ 1.66
SYNGAP1-206ENST00000479510 HMX2A2RU54 273 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 A6NHS1 94 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 H0Y3Z8 333 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 NVLO15381 856 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ZNF189O75820 626 aaPredicted RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 MRPS35P82673 323 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 BST2Q10589 180 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ACSBG2Q5FVE4 666 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 TTC7BQ86TV6 843 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 SULF1Q8IWU6 871 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 DCPSQ96C86 337 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 CSPG4P5Q96PW8 444 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 DHX35Q9H5Z1 703 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 MTMR10Q9NXD2 777 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 HBS1LQ9Y450 684 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 POLR2AP24928 1970 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 RBM47A0AV96 593 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 DGKIO75912 1065 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 PSMG1O95456 288 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 PGM1P36871 562 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 BCAT1P54687 386 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 SLC34A1Q06495 639 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 SLC10A2Q12908 348 aaPredicted RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 BMPR2Q13873 1038 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 KPNB1Q14974 876 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ZBTB6Q15916 424 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 NBPF20Q3BBV1 942 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 TRMT10BQ6PF06 316 aaKnown RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 STRADAQ7RTN6 431 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ARID3BQ8IVW6 561 aaPredicted RBP25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 KIRREL3Q8IZU9 778 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ANKRD52Q8NB46 1076 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 BEST2Q8NFU1 509 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 STMN2Q93045 179 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 ZNF333Q96JL9 665 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 OLFM3Q96PB7 478 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 NAT9Q9BTE0 207 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 MECRQ9BV79 373 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 PCMTD2Q9NV79 361 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 TAGLN3Q9UI15 199 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 CITO14578 2027 aa25.43■■□□□ 1.66
SYNGAP1-206ENST00000479510 A0A0A0MRY4 1105 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 UGT1A9O60656 530 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 STX3Q13277 289 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 RCN1Q15293 331 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 HSF5Q4G112 596 aaPredicted RBP25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 DNAL1Q4LDG9 190 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 TAPT1Q6NXT6 567 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 ALYREFQ86V81 257 aaKnown RBP25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 TFB1MQ8WVM0 346 aaKnown RBP25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 SNX27Q96L92 541 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 SPATA13Q96N96 652 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 UGT1A7Q9HAW7 530 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 UGT1A10Q9HAW8 530 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 UGT1A8Q9HAW9 530 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 FAM49BQ9NUQ9 324 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 RALGAPA2Q2PPJ7 1873 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 MCM3APO60318 1980 aa25.42■■□□□ 1.66
SYNGAP1-206ENST00000479510 MUM1Q2TAK8 710 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 CAPRIN2Q6IMN6 1127 aaKnown RBP25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 HTR3CQ8WXA8 447 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 CDKL2Q92772 493 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 PPP1R16BQ96T49 567 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 ZFATQ9P243 1243 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 PPARGC1AQ9UBK2 798 aaKnown RBP25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 ZNF212Q9UDV6 495 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 SDR42E2A6NKP2 422 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 STK10O94804 968 aaKnown RBP25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 SERPINA6P08185 405 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 MROH9Q5TGP6 573 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 LRRC8BQ6P9F7 803 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 CRYBG2Q8N1P7 616 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 HSFY1Q96LI6 401 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 KCTD15Q96SI1 283 aaPredicted RBP25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 FERMT1Q9BQL6 677 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 C16orf70Q9BSU1 422 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 C1orf21Q9H246 121 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 DTLQ9NZJ0 730 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 USP3Q9Y6I4 520 aa25.41■■□□□ 1.66
SYNGAP1-206ENST00000479510 B2RBV5 119 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 NCBP2-AS2Q69YL0 99 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ANO7Q6IWH7 933 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 NET1Q7Z628 596 aaPredicted RBP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 MPP5Q8N3R9 675 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 MICAL1Q8TDZ2 1067 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 OSBPL1AQ9BXW6 950 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 B3GNT5Q9BYG0 378 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 FAM96AQ9H5X1 160 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ADARB2Q9NS39 739 aaKnown RBP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 NME7Q9Y5B8 376 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 SF3B1O75533 1304 aaKnown RBP eCLIP25.4■■□□□ 1.669e-9■■■■■ 62.4
SYNGAP1-206ENST00000479510 C2orf71A6NGG8 1288 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 SPECC1L-ADORA2AF8WAN1 911 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 OPHN1O60890 802 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 GLRA3O75311 464 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ARL4AP40617 200 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 AQP5P55064 265 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 CDC42EP1Q00587 391 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 NIPAL4Q0D2K0 466 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms