RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SLITRK1Q96PX8 696 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 CDRT15Q96T59 188 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 C1orf232A0A0U1RR37 186 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 ZBTB14O43829 449 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 KRT1P04264 644 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 ERBB2P04626 1255 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 TRAF2Q12933 501 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 ZNF720Q7Z2F6 126 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 LRRC47Q8N1G4 583 aaKnown RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 TRUB1Q8WWH5 349 aaKnown RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 XPO7Q9UIA9 1087 aaKnown RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 SLC8A2Q9UPR5 921 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 TRIM64CA6NLI5 447 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 GUCY1B2O75343 617 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 CAPNS1P04632 268 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 ADAM17P78536 824 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 C16orf46Q6P387 395 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 ATG14Q6ZNE5 492 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PTAR1Q7Z6K3 402 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 FAM178BQ8IXR5 827 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PDIK1LQ8N165 341 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 MAELQ96JY0 434 aaKnown RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 PARVGQ9HBI0 331 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PRELID1Q9Y255 219 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 ZBTB1Q9Y2K1 713 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PCDHGA3Q9Y5H0 932 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 N6AMT1Q9Y5N5 214 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 CXorf49A8MYA2 514 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 SLC26A4O43511 780 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 RFPL1O75677 317 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 KRT5P13647 590 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 MFAP3P55082 362 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PMS2P3Q13401 168 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 IKBKEQ14164 716 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 OXA1LQ15070 435 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 BTLAQ7Z6A9 289 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 MAPKAPK5Q8IW41 473 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 ZSCAN18Q8TBC5 510 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 OSBPL11Q9BXB4 747 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 FRMD8Q9BZ67 464 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 AVENQ9NQS1 362 aaPredicted RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 DRG1Q9Y295 367 aaKnown RBP21.87■■□□□ 1.09
SDF4-206ENST00000478938 CPQQ9Y646 472 aa21.87■■□□□ 1.09
SDF4-206ENST00000478938 PSMD11O00231 422 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 KPNA4O00629 521 aaPredicted RBP21.86■■□□□ 1.09
SDF4-206ENST00000478938 CHEK2O96017 543 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 AKR1B1P15121 316 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 MXI1P50539 228 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 NSUN2Q08J23 767 aaKnown RBP eCLIP21.86■■□□□ 1.09
SDF4-206ENST00000478938 PERM1Q5SV97 790 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 TEDDM1Q5T9Z0 273 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 SLFN12Q8IYM2 578 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 CFAP36Q96G28 342 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 MRPL46Q9H2W6 279 aaKnown RBP21.86■■□□□ 1.09
SDF4-206ENST00000478938 JMJD4Q9H9V9 463 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 RAB20Q9NX57 234 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 NUP98P52948 1817 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 CFLARO15519 480 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 APOEP02649 317 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 MCF2P10911 925 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 SLC30A10Q6XR72 485 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 USP43Q70EL4 1123 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 SLC26A11Q86WA9 606 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 ZC3H7AQ8IWR0 971 aaKnown RBP21.86■■□□□ 1.09
SDF4-206ENST00000478938 ZNF786Q8N393 782 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 OTUD5Q96G74 571 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 ALPK1Q96QP1 1244 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 RTKNQ9BST9 563 aa21.86■■□□□ 1.09
SDF4-206ENST00000478938 NPLQ9BXD5 320 aaPredicted RBP21.86■■□□□ 1.09
SDF4-206ENST00000478938 COL18A1P39060 1754 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 A0A087WXM4 84 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 DYNC1LI2O43237 492 aaPredicted RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 CLASP2O75122 1294 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 UNGP13051 313 aaPredicted RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 RPL10AP62906 217 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 LSM12Q3MHD2 195 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 FASTKD1Q53R41 847 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 TATDN1Q6P1N9 297 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 PCGF5Q86SE9 256 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 CEP295NLQ96MC4 621 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 SLC29A1Q99808 456 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 RIC8BQ9NVN3 520 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 TFCP2L1Q9NZI6 479 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 ATF5Q9Y2D1 282 aaPredicted RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 ST14Q9Y5Y6 855 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 ITGAVP06756 1048 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 SNRPAP09012 282 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 SLC1A6P48664 564 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 CDK8P49336 464 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 DYNLT1P63172 113 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 TSPY1Q01534 308 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 IFITM2Q01629 132 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 SELENBP1Q13228 472 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 CEACAM7Q14002 265 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 NDUFAF2Q8N183 169 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 PDCD6IPQ8WUM4 868 aaKnown RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 ACDQ96AP0 544 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms