RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SLC2A11Q9BYW1 496 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 ZDHHC5Q9C0B5 715 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
ABCF3-212ENST00000478288 CISHQ9NSE2 258 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 USP36Q9P275 1121 aaKnown RBP13.63□□□□□ -0.23
ABCF3-212ENST00000478288 THAP10Q9P2Z0 257 aaPredicted RBP13.63□□□□□ -0.23
ABCF3-212ENST00000478288 NUDT5Q9UKK9 219 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 CYP8B1Q9UNU6 501 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 STON1Q9Y6Q2 735 aa13.63□□□□□ -0.23
ABCF3-212ENST00000478288 KNTC1P50748 2209 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 CELSR3Q9NYQ7 3312 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 IGLV3-19P01714 112 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 GNSP15586 552 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 CD6P30203 668 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 CORO1AP31146 461 aaKnown RBP13.62□□□□□ -0.23
ABCF3-212ENST00000478288 RAD23BP54727 409 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 SLC8A3P57103 927 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 ZNF445P59923 1031 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 PM20D1Q6GTS8 502 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 ANKS1BQ7Z6G8 1248 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 SLC4A11Q8NBS3 891 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 CADM4Q8NFZ8 388 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 DNASE2BQ8WZ79 361 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 PIWIL1Q96J94 861 aaKnown RBP13.62□□□□□ -0.23
ABCF3-212ENST00000478288 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
ABCF3-212ENST00000478288 GTPBP2Q9BX10 602 aaKnown RBP13.62□□□□□ -0.23
ABCF3-212ENST00000478288 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 MARCH2Q9P0N8 246 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 RASAL2Q9UJF2 1139 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 AGO1Q9UL18 857 aaKnown RBP13.62□□□□□ -0.23
ABCF3-212ENST00000478288 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 STRIP2Q9ULQ0 834 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 BAHCC1Q9P281 2608 aa13.62□□□□□ -0.23
ABCF3-212ENST00000478288 MUC22E2RYF6 1773 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 FAM221BA6H8Z2 402 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 NDUFS2O75306 463 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 GJB3O75712 270 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 CYBBP04839 570 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 OXTRP30559 389 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 RDXP35241 583 aaKnown RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 SIM1P81133 766 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 PDE4CQ08493 712 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 EFEMP1Q12805 493 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 GEN1Q17RS7 908 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 ZNF423Q2M1K9 1284 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 FUT11Q495W5 492 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 RBBP8NLQ8NC74 664 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 SEMA4DQ92854 862 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 BHMTQ93088 406 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 PRDM16Q9HAZ2 1276 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 WSB2Q9NYS7 404 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-212ENST00000478288 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 MSRB2Q9Y3D2 182 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 RAD54BQ9Y620 910 aa13.61□□□□□ -0.23
ABCF3-212ENST00000478288 GOLGA4Q13439 2230 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 XPO1O14980 1071 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 CETN3O15182 167 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 SLC16A3O15427 465 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 TIMM44O43615 452 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 LATS1O95835 1130 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 ZBED1O96006 694 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 CD59P13987 128 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 IL12RB1P42701 662 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 BCAT1P54687 386 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 YWHAGP61981 247 aaKnown RBP eCLIP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 TRIP4Q15650 581 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 KIAA1324Q6UXG2 1013 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 DEFB119Q8N690 84 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 ARID3AQ99856 593 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 MKRN2Q9H000 416 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 MMRN2Q9H8L6 949 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 STOML2Q9UJZ1 356 aa13.6□□□□□ -0.23
ABCF3-212ENST00000478288 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
ABCF3-212ENST00000478288 A0A1B0GTW7 788 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 WASH3PC4AMC7 463 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 SYNCRIPO60506 623 aaKnown RBP13.59□□□□□ -0.23
ABCF3-212ENST00000478288 ZNF202O95125 648 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 TOP3BO95985 862 aaKnown RBP13.59□□□□□ -0.23
ABCF3-212ENST00000478288 SPINK2P20155 84 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 TKTL1P51854 596 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 BHLHA9Q7RTU4 235 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 DENND1CQ8IV53 801 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms