RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ZNF564Q8TBZ8 553 aaPredicted RBP20.77■□□□□ 0.92
ACTB-210ENST00000477812 RSAD2Q8WXG1 361 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 E2F7Q96AV8 911 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 PLD4Q96BZ4 506 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 RAB6CQ9H0N0 254 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 KCNK12Q9HB15 430 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 OSGEPQ9NPF4 335 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 VCANP13611 3396 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 A0A0A6YYK5 440 aaPredicted RBP20.76■□□□□ 0.91
ACTB-210ENST00000477812 A0A0U1RQJ8 604 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 E2F8A0AVK6 867 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 CXCR3P49682 368 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 KPNA1P52294 538 aaPredicted RBP20.76■□□□□ 0.91
ACTB-210ENST00000477812 ATXN1P54253 815 aaKnown RBP20.76■□□□□ 0.91
ACTB-210ENST00000477812 HDAC4P56524 1084 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 TBX4P57082 545 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 ATP11AP98196 1134 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 HTR3DQ70Z44 454 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 STRADAQ7RTN6 431 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 RHOT2Q8IXI1 618 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 SLC35G2Q8TBE7 412 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 BPIFB1Q8TDL5 484 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 ATRIPQ8WXE1 791 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 NXPE3Q969Y0 559 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 ZNF830Q96NB3 372 aaPredicted RBP20.76■□□□□ 0.91
ACTB-210ENST00000477812 CTTNBP2NLQ9P2B4 639 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 IGSF9Q9P2J2 1179 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 SALL4Q9UJQ4 1053 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 ANAPC7Q9UJX3 599 aa20.76■□□□□ 0.91
ACTB-210ENST00000477812 BTNL10A8MVZ5 291 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 I6L893 689 aaPredicted RBP20.75■□□□□ 0.91
ACTB-210ENST00000477812 HMBSP08397 361 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 IRF1P10914 325 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 RDXP35241 583 aaKnown RBP20.75■□□□□ 0.91
ACTB-210ENST00000477812 HADHBP55084 474 aaKnown RBP20.75■□□□□ 0.91
ACTB-210ENST00000477812 NME3Q13232 169 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 MFSD6LQ8IWD5 586 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 ARFGAP1Q8N6T3 406 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 NIPA2Q8N8Q9 360 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 DEPDC1BQ8WUY9 529 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 ASIC4Q96FT7 647 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 BTBD6Q96KE9 485 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 ANLNQ9NQW6 1124 aa20.75■□□□□ 0.91
ACTB-210ENST00000477812 TCF20Q9UGU0 1960 aaKnown RBP20.75■□□□□ 0.91
ACTB-210ENST00000477812 KCNU1A8MYU2 1149 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 SCAMP3O14828 347 aaKnown RBP20.74■□□□□ 0.91
ACTB-210ENST00000477812 NRDCO43847 1150 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 F9P00740 461 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 ASGR2P07307 311 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 PSMA2P25787 234 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 GBP1P32455 592 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 PPP2R5DQ14738 602 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 ZC3H12AQ5D1E8 599 aaKnown RBP20.74■□□□□ 0.91
ACTB-210ENST00000477812 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 NUGGCQ68CJ6 796 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 FAM172AQ8WUF8 416 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 TMEM51Q9NW97 253 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 DUSP10Q9Y6W6 482 aa20.74■□□□□ 0.91
ACTB-210ENST00000477812 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 ARNTLO00327 626 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 PSMC3P17980 439 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 CORO1AP31146 461 aaKnown RBP20.73■□□□□ 0.91
ACTB-210ENST00000477812 CCR1P32246 355 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 DEUP1Q05D60 604 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 GRM2Q14416 872 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 CDO1Q16878 200 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 KIAA1328Q86T90 577 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 BBS7Q8IWZ6 715 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 FAM217AQ8IXS0 508 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 SLC44A3Q8N4M1 653 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 FAM83CQ9BQN1 747 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 CD320Q9NPF0 282 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.73■□□□□ 0.913e-20■■■■□ 20.1
ACTB-210ENST00000477812 ARHGEF38Q9NXL2 777 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 TRIM10Q9UDY6 481 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 IP6K2Q9UHH9 426 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 STOML2Q9UJZ1 356 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 AGO1Q9UL18 857 aaKnown RBP20.73■□□□□ 0.91
ACTB-210ENST00000477812 SH3BP1Q9Y3L3 701 aa20.73■□□□□ 0.91
ACTB-210ENST00000477812 LATS1O95835 1130 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 ARHGAP25P42331 645 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 BRMS1LQ5PSV4 323 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 DENND1CQ8IV53 801 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 AZIN2Q96A70 460 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 NECAB3Q96P71 396 aaPredicted RBP20.72■□□□□ 0.91
ACTB-210ENST00000477812 DCLK3Q9C098 648 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 XPO7Q9UIA9 1087 aaKnown RBP20.72■□□□□ 0.91
ACTB-210ENST00000477812 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
ACTB-210ENST00000477812 COL4A3Q01955 1670 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 MYO1FO00160 1098 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 GFRA2O00451 464 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 LRCH4O75427 683 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 PROSCO94903 275 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 CCDC175P0C221 793 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 SLC2A3P11169 496 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 MAN1A1P33908 653 aa20.71■□□□□ 0.91
ACTB-210ENST00000477812 HARS2P49590 506 aaKnown RBP20.71■□□□□ 0.91
ACTB-210ENST00000477812 PIGHQ14442 188 aaPredicted RBP20.71■□□□□ 0.91
ACTB-210ENST00000477812 ACAP1Q15027 740 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms