RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-213ENST00000476777 RAI2Q9Y5P3 530 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 A0A1W2PQH9 124 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 H0Y8X5 98 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 TLX3O43711 291 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-213ENST00000476777 STC2O76061 302 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 C7P10643 843 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 RARGP13631 454 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 ACSL1P33121 698 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 GRIA4P48058 902 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 CCT8P50990 548 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 TEAD4Q15561 434 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 LAYNQ6UX15 382 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 SCARA5Q6ZMJ2 495 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-213ENST00000476777 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
BRCA1-213ENST00000476777 ENGASEQ8NFI3 743 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 SORCS1Q8WY21 1168 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 NXPE2Q96DL1 559 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 TM9SF3Q9HD45 589 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.96□□□□□ -0.49
BRCA1-213ENST00000476777 ELOVL2Q9NXB9 296 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 CLEC4EQ9ULY5 219 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 SMC3Q9UQE7 1217 aa11.96□□□□□ -0.49
BRCA1-213ENST00000476777 COL12A1Q99715 3063 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 CLIC2O15247 247 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
BRCA1-213ENST00000476777 PAPSS1O43252 624 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-213ENST00000476777 CD2BP2O95400 341 aaKnown RBP11.95□□□□□ -0.5
BRCA1-213ENST00000476777 EPHX1P07099 455 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 CYP2J2P51589 502 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ORC1Q13415 861 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 RABEP1Q15276 862 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF699Q32M78 642 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF667Q5HYK9 610 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 C10orf120Q5SQS8 335 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 TMEM215Q68D42 235 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 CRYBG2Q8N1P7 616 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 C12orf29Q8N999 325 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 OR2T3Q8NH03 318 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF507Q8TCN5 953 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 PLEKHO2Q8TD55 490 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 FAM49BQ9NUQ9 324 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 FTSJ1Q9UET6 329 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 HMGXB4Q9UGU5 601 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
BRCA1-213ENST00000476777 MYLKQ15746 1914 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 TSPAN3O60637 253 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 PHACTR2O75167 634 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 JUPP14923 745 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CHKAP35790 457 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CTSKP43235 329 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CASP4P49662 377 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 NDST1P52848 882 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CLDN6P56747 220 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 IL9RQ01113 521 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 SEMG2Q02383 582 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 BIRC3Q13489 604 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CAMK2GQ13555 558 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-213ENST00000476777 NCOA4Q13772 614 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 EIF4HQ15056 248 aaKnown RBP11.94□□□□□ -0.5
BRCA1-213ENST00000476777 E2F5Q15329 346 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 C6orf118Q5T5N4 469 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 SERPINA13PQ6UXR4 307 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CLEC20AQ6ZU45 233 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 SCD5Q86SK9 330 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF276Q8N554 614 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 BIRC7Q96CA5 298 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-213ENST00000476777 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 LHX5Q9H2C1 402 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 PCDHGA1Q9Y5H4 931 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
BRCA1-213ENST00000476777 MUC22E2RYF6 1773 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-213ENST00000476777 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 TIMM44O43615 452 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 VNN1O95497 513 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 SEMA4FO95754 770 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 CD27P26842 260 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 ADORA2BP29275 332 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
BRCA1-213ENST00000476777 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
BRCA1-213ENST00000476777 INAVAQ3KP66 663 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 TADA2BQ86TJ2 420 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 PDILTQ8N807 584 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 HNRNPABQ99729 332 aaKnown RBP11.93□□□□□ -0.5
BRCA1-213ENST00000476777 TNMDQ9H2S6 317 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 TMEM245Q9H330 911 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 KBTBD4Q9NVX7 518 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms