RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 VSIG1Q86XK7 387 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CTAGE3PQ8IX95 158 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 KIRREL3Q8IZU9 778 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 BANPQ8N9N5 519 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 ERP27Q96DN0 273 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CRTAC1Q9NQ79 661 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 FZD10Q9ULW2 581 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 MYBPHLA2RUH7 354 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CFAP69A5D8W1 941 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 M0QYT0 321 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 GABRDO14764 452 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CREB3O43889 395 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 UGT1A9O60656 530 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CHRNA1P02708 482 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 LRPAP1P30533 357 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 OVGP1Q12889 678 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 PREPLQ4J6C6 727 aaPredicted RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 ZNF534Q76KX8 674 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 STRADAQ7RTN6 431 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 IFNL1Q8IU54 200 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 AGAP11Q8TF27 550 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 SLC44A1Q8WWI5 657 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 SENP8Q96LD8 212 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 APBA2Q99767 749 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 UGT1A7Q9HAW7 530 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 UGT1A10Q9HAW8 530 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 UGT1A8Q9HAW9 530 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 POPDC2Q9HBU9 364 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 IKBKGQ9Y6K9 419 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 IGHA2P01877 340 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 AMHP03971 560 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 VAV1P15498 845 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 TARSP26639 723 aaKnown RBP17.21■□□□□ 0.35
TVP23B-202ENST00000476139 ZNF449Q6P9G9 518 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 LRRC8CQ8TDW0 803 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 SMYD2Q9NRG4 433 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 Q9Y3F1 56 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 MT-ND3P03897 115 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 FYNP06241 537 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 INHBAP08476 426 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 GBP2P32456 591 aaPredicted RBP17.21■□□□□ 0.35
TVP23B-202ENST00000476139 TKTL1P51854 596 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 MRPS6P82932 125 aaKnown RBP17.21■□□□□ 0.35
TVP23B-202ENST00000476139 IRF5Q13568 498 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 HEATR6Q6AI08 1181 aaKnown RBP17.21■□□□□ 0.35
TVP23B-202ENST00000476139 DENND5BQ6ZUT9 1274 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 GPRIN1Q7Z2K8 1008 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
TVP23B-202ENST00000476139 NCAPGQ9BPX3 1015 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 RHOBTB2Q9BYZ6 727 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 CYLDQ9NQC7 956 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 ARHGEF4Q9NR80 690 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 KRT82Q9NSB4 513 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 PIGVQ9NUD9 493 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 TTLL3Q9Y4R7 772 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 MAD1L1Q9Y6D9 718 aa17.21■□□□□ 0.35
TVP23B-202ENST00000476139 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 I3L4J1 428 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 GCATO75600 419 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 AKR1A1P14550 325 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 SCNN1AP37088 669 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 SLC8A3P57103 927 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 PAN2Q504Q3 1202 aaKnown RBP17.2■□□□□ 0.34
TVP23B-202ENST00000476139 CDKL3Q8IVW4 592 aaPredicted RBP17.2■□□□□ 0.34
TVP23B-202ENST00000476139 ARHGAP39Q9C0H5 1083 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 ANLNQ9NQW6 1124 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 GTF2IRD1Q9UHL9 959 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 HAO1Q9UJM8 370 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 MFSD11O43934 449 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 PYGBP11216 843 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 ARL4AP40617 200 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 NR2C2P49116 596 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 CRHR2Q13324 411 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 TRMT10BQ6PF06 316 aaKnown RBP17.2■□□□□ 0.34
TVP23B-202ENST00000476139 SIX6OS1Q8N1H7 587 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 PCED1BQ96HM7 432 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 AGO3Q9H9G7 860 aaKnown RBP17.2■□□□□ 0.34
TVP23B-202ENST00000476139 DCTN4Q9UJW0 460 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
TVP23B-202ENST00000476139 CFAP73A6NFT4 308 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 MANSC4A6NHS7 340 aaPredicted RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 YJEFN3A6XGL0 299 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ZNF487B1APH4 448 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 E7ENQ6 273 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 I6L893 689 aaPredicted RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 THP07101 528 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 CRADDP78560 199 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 SH2D5Q6ZV89 423 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms