RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 IPO9Q96P70 1041 aaKnown RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 NUP58Q9BVL2 599 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 ASB7Q9H672 318 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 TM9SF3Q9HD45 589 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 AGPAT3Q9NRZ7 376 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 RMND1Q9NWS8 449 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 CGNQ9P2M7 1197 aaKnown RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 C2CD2Q9Y426 696 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 GFRA2O00451 464 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 GLDCP23378 1020 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 CTSKP43235 329 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 MAGEA11P43364 429 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 GRIA4P48058 902 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 CYP2J2P51589 502 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 SNRPFP62306 86 aaKnown RBP14.85□□□□□ -0.03
ATG9A-220ENST00000475339 MYL7Q01449 175 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 STARD3Q14849 445 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 C6orf132Q5T0Z8 1188 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 FAM124AQ86V42 546 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 CACUL1Q86Y37 369 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 BRSK2Q8IWQ3 736 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 KIAA0895Q8NCT3 520 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 SNRNP27Q8WVK2 155 aaKnown RBP14.85□□□□□ -0.03
ATG9A-220ENST00000475339 SIPA1Q96FS4 1042 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 C6orf106Q9H6K1 298 aaPredicted RBP14.85□□□□□ -0.03
ATG9A-220ENST00000475339 KIAA1586Q9HCI6 787 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 HSPBP1Q9NZL4 362 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 CLCA2Q9UQC9 943 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 STON1Q9Y6Q2 735 aa14.85□□□□□ -0.03
ATG9A-220ENST00000475339 ZNF233A6NK53 670 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 CLIC2O15247 247 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 KLK10O43240 276 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 PAPSS1O43252 624 aaPredicted RBP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 ATP2C2O75185 946 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 RHOBTB3O94955 611 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 BDNFP23560 247 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 HOXD13P35453 343 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 PPP3CCP48454 512 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 UBE2HP62256 183 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 TAF10Q12962 218 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 PNOCQ13519 176 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 CRELD2Q6UXH1 353 aaPredicted RBP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 WBP2Q969T9 261 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 TIGD1Q96MW7 591 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.84□□□□□ -0.03
ATG9A-220ENST00000475339 SH3BP1Q9Y3L3 701 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 ABCA12Q86UK0 2595 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 BOD1L1Q8NFC6 3051 aa14.84□□□□□ -0.03
ATG9A-220ENST00000475339 A0A1B0GTQ1 180 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 NEDD8-MDP1E9PL57 170 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 TGFB1I1O43294 461 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 HUS1O60921 280 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 GADD45BO75293 160 aaPredicted RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 IGLV3-19P01714 112 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 NFKB2Q00653 900 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 FAM171BQ6P995 826 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 NT5DC4Q86YG4 428 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 EID2Q8N6I1 236 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 XXYLT1Q8NBI6 393 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 ZSWIM2Q8NEG5 633 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 CACTINQ8WUQ7 758 aaKnown RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 KCNE4Q8WWG9 221 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 PRCCQ92733 491 aaPredicted RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 SMARCE1Q969G3 411 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 MYLPFQ96A32 169 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 ZNF560Q96MR9 790 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 ZNF578Q96N58 590 aaPredicted RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 OSGEPQ9NPF4 335 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 KCNK4Q9NYG8 393 aa14.83□□□□□ -0.04
ATG9A-220ENST00000475339 MAGEC2Q9UBF1 373 aaPredicted RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 R3HCC1Q9Y3T6 440 aaKnown RBP14.83□□□□□ -0.04
ATG9A-220ENST00000475339 DOPEY1Q5JWR5 2465 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 COCHO43405 550 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 CALUO43852 315 aaPredicted RBP14.82□□□□□ -0.04
ATG9A-220ENST00000475339 CACNG3O60359 315 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 EXOC3O60645 756 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 TMEM191BP0C7N4 346 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 MYF5P13349 255 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 TYRP14679 529 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 ANXA13P27216 316 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 PSMC1P62191 440 aaKnown RBP14.82□□□□□ -0.04
ATG9A-220ENST00000475339 SURF1Q15526 300 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 SNRNP35Q16560 246 aaKnown RBP14.82□□□□□ -0.04
ATG9A-220ENST00000475339 C4orf17Q53FE4 359 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 SCARA3Q6AZY7 606 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 C4orf50Q6ZRC1 276 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 CBWD2Q8IUF1 395 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 TMEM86AQ8N2M4 240 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 DCBLD1Q8N8Z6 715 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 XPO6Q96QU8 1125 aaKnown RBP14.82□□□□□ -0.04
ATG9A-220ENST00000475339 BBS2Q9BXC9 721 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 PCED1AQ9H1Q7 454 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 EHD2Q9NZN4 543 aa14.82□□□□□ -0.04
ATG9A-220ENST00000475339 PCDHB1Q9Y5F3 818 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms