RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 STK33Q9BYT3 514 aa16.69■□□□□ 0.26
ITGB1-210ENST00000474568 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
ITGB1-210ENST00000474568 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
ITGB1-210ENST00000474568 SYNCQ9H7C4 482 aa16.69■□□□□ 0.26
ITGB1-210ENST00000474568 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
ITGB1-210ENST00000474568 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
ITGB1-210ENST00000474568 MYOFQ9NZM1 2061 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 VPS13AQ96RL7 3174 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 GOLGA6L7A0A1B0GV03 622 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 SYCE3A1L190 88 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 SGK1O00141 431 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 HRO43593 1189 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 GRAP2O75791 330 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 ERBB2P04626 1255 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 CYBBP04839 570 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 CYP11B1P15538 503 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 TNFRSF4P43489 277 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
ITGB1-210ENST00000474568 BPIFB4P59827 614 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 MRPS21P82921 87 aaKnown RBP16.68■□□□□ 0.26
ITGB1-210ENST00000474568 PTPN20Q4JDL3 420 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 FYB2Q5VWT5 728 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 FAM183BPQ6ZVS7 135 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 NOP9Q86U38 636 aaKnown RBP16.68■□□□□ 0.26
ITGB1-210ENST00000474568 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
ITGB1-210ENST00000474568 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 IL17RCQ8NAC3 791 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 TSTD1Q8NFU3 115 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 CCDC26Q8TAB7 109 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 DDI1Q8WTU0 396 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 NOX5Q96PH1 765 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 CLEC4EQ9ULY5 219 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
ITGB1-210ENST00000474568 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 PRRT4C9JH25 899 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 MOCS2O96007 188 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 PENKP01210 267 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 CISD3P0C7P0 127 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■□□□ 13.6
ITGB1-210ENST00000474568 PITX1P78337 314 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 SIM2Q14190 667 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 EGFLAMQ63HQ2 1017 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 ANO7Q6IWH7 933 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 RFWD3Q6PCD5 774 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 CEP68Q76N32 757 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 APTXQ7Z2E3 356 aaKnown RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 WDR5BQ86VZ2 330 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 ZNF513Q8N8E2 541 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 IPO4Q8TEX9 1081 aaKnown RBP16.67■□□□□ 0.26
ITGB1-210ENST00000474568 TPSD1Q9BZJ3 242 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 POPDC2Q9HBU9 364 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 MMP17Q9ULZ9 603 aa16.67■□□□□ 0.26
ITGB1-210ENST00000474568 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 A0A0A0MRY4 1105 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 AXIN1O15169 862 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 APBB3O95704 486 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 MMEP08473 750 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 CHRM1P11229 460 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-210ENST00000474568 ZNF165P49910 485 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 SGSHP51688 502 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 DGKEP52429 567 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 YWHAZP63104 245 aaKnown RBP16.66■□□□□ 0.26
ITGB1-210ENST00000474568 PREPLQ4J6C6 727 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-210ENST00000474568 C2CD6Q53TS8 623 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 DCAF6Q58WW2 860 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 TMEM92Q6UXU6 159 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 NUDT18Q6ZVK8 323 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 FAM217AQ8IXS0 508 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 DEFB106AQ8N104 65 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 CPXM2Q8N436 756 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 SLC20A1Q8WUM9 679 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 FCRL2Q96LA5 508 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-210ENST00000474568 SERPINB11Q96P15 392 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 ACOX2Q99424 681 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 NCDNQ9UBB6 729 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 HCN2Q9UL51 889 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 RAB23Q9ULC3 237 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 INVSQ9Y283 1065 aa16.66■□□□□ 0.26
ITGB1-210ENST00000474568 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 ACSL4O60488 711 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 ADAM23O75077 832 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 IGLV3-27P01718 113 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 HOXA6P31267 233 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 SLC6A4P31645 630 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 SLC11A2P49281 568 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
ITGB1-210ENST00000474568 CRY1Q16526 586 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 GEN1Q17RS7 908 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 MPPE1Q53F39 396 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 EOGTQ5NDL2 527 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
ITGB1-210ENST00000474568 OLFML1Q6UWY5 402 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms