RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
VAMP4-203ENST00000474047 EZH1Q92800 747 aaPredicted RBP14.81□□□□□ -0.04
VAMP4-203ENST00000474047 CBX8Q9HC52 389 aa14.81□□□□□ -0.04
VAMP4-203ENST00000474047 TJP2Q9UDY2 1190 aa14.81□□□□□ -0.04
VAMP4-203ENST00000474047 FAM170AA1A519 330 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CACNG3O60359 315 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TSPAN3O60637 253 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 HSF2BPO75031 334 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 GRAP2O75791 330 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 ERBB2P04626 1255 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 FYNP06241 537 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 GLI1P08151 1106 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CCDC172P0C7W6 258 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 GBP1P32455 592 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 MRPS21P82921 87 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CDK17Q00537 523 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 RING1Q06587 406 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 IQCB1Q15051 598 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 MPPE1Q53F39 396 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 C10orf76Q5T2E6 689 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 ADGRF1Q5T601 910 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SYPL2Q5VXT5 272 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 FAM183BPQ6ZVS7 135 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 BEND5Q7L4P6 421 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 APTXQ7Z2E3 356 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 LUZP1Q86V48 1076 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CPXM2Q8N436 756 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CCDC33Q8N5R6 958 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 USP33Q8TEY7 942 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 RNF34Q969K3 372 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 FAM204AQ9H8W3 233 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TLR6Q9Y2C9 796 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 WDFY4Q6ZS81 3184 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SYNJ2BP-COX16A0A087WUM0 186 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 PROB1E7EW31 1015 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TEX33O43247 280 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 GFRA3O60609 400 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 PAPSS2O95340 614 aaPredicted RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 LATS1O95835 1130 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TRUB2O95900 331 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 APOEP02649 317 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 FNTBP49356 437 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 JAM2P57087 298 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 ZNF445P59923 1031 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 RNASE9P60153 205 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SLC6A3Q01959 620 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 DMC1Q14565 340 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TAF5Q15542 800 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 PTPN20Q4JDL3 420 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SYT13Q7L8C5 426 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 DEFB106AQ8N104 65 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TERB1Q8NA31 727 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 CPA5Q8WXQ8 436 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 TMA16Q96EY4 203 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SEPT11Q9NVA2 429 aaKnown RBP14.8□□□□□ -0.04
VAMP4-203ENST00000474047 ASNSD1Q9NWL6 643 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 C2orf42Q9NWW7 574 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 COX16Q9P0S2 106 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 SLC12A6Q9UHW9 1150 aa14.8□□□□□ -0.04
VAMP4-203ENST00000474047 A0A0A0MRY4 1105 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 KLF8O95600 359 aaPredicted RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 MOCS2O96007 188 aaPredicted RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 LMNAP02545 664 aaKnown RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 CDH5P33151 784 aaPredicted RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 CDR2Q01850 454 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 MESP2Q0VG99 397 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 NNTQ13423 1086 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 EMC10Q5UCC4 262 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 NAA35Q5VZE5 725 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 SDE2Q6IQ49 451 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 TRMT11Q7Z4G4 463 aaKnown RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 TAC4Q86UU9 113 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 SLC20A1Q8WUM9 679 aa14.79□□□□□ -0.04
VAMP4-203ENST00000474047 DDX1Q92499 740 aaKnown RBP14.79□□□□□ -0.04
VAMP4-203ENST00000474047 K7ESF4 209 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 TRIM24O15164 1050 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ACSL4O60488 711 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 HSF5Q4G112 596 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 EOGTQ5NDL2 527 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 OLFML1Q6UWY5 402 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 TRIM72Q6ZMU5 477 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 LONP2Q86WA8 852 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 SFTPA1Q8IWL2 248 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 CAMKK1Q8N5S9 505 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ZNF513Q8N8E2 541 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ZBTB44Q8NCP5 570 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 TSTD1Q8NFU3 115 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 PIWIL1Q96J94 861 aaKnown RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 HHIPQ96QV1 700 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 POLR3BQ9NW08 1133 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 NOCTQ9UK39 431 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms