RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PLK4O00444 970 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 BCAT2O15382 392 aaPredicted RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 CYP26A1O43174 497 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 ARHGAP6O43182 974 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 TNFSF14O43557 240 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SYT1P21579 422 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 CD6P30203 668 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 EIF2S3P41091 472 aaKnown RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 IL12RB1P42701 662 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 TPMTP51580 245 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 COPAP53621 1224 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 MAP3K7CLP57077 242 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 DLG4P78352 724 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 CLDN10P78369 228 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SEMG2Q02383 582 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SMAD1Q15797 465 aaKnown RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 GEN1Q17RS7 908 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 TAF1BQ53T94 588 aaPredicted RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 TMEM215Q68D42 235 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SCARA5Q6ZMJ2 495 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SCD5Q86SK9 330 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 METTL3Q86U44 580 aaKnown RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 CRYBG2Q8N1P7 616 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 SLC2A14Q8TDB8 520 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 ARID3AQ99856 593 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 GPR174Q9BXC1 333 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 KIAA1586Q9HCI6 787 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 CYLDQ9NQC7 956 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 COMMD8Q9NX08 183 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.83□□□□□ -0.84
VCL-204ENST00000472585 NFE2L3Q9Y4A8 694 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 AK5Q9Y6K8 562 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 STON1Q9Y6Q2 735 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 MORC2Q9Y6X9 1032 aaPredicted RBP9.83□□□□□ -0.84
VCL-204ENST00000472585 TMEM131Q92545 1883 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 A0A1W2PQH9 124 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 METTL12A8MUP2 240 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 KCNK3O14649 394 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 EIF3DO15371 548 aaKnown RBP eCLIP9.82□□□□□ -0.84
VCL-204ENST00000472585 STC2O76061 302 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 PENKP01210 267 aaPredicted RBP9.82□□□□□ -0.84
VCL-204ENST00000472585 NCAM1P13591 858 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 JUPP14923 745 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 ATICP31939 592 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 HNF1BP35680 557 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 ATP5C1P36542 298 aaKnown RBP9.82□□□□□ -0.84
VCL-204ENST00000472585 DGKGP49619 791 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 NDST1P52848 882 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 MFAP3P55082 362 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 KCNC4Q03721 635 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 TRPC3Q13507 836 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 BMT2Q1RMZ1 405 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 KCNT1Q5JUK3 1230 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 FAM26FQ5R3K3 315 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 C1orf220Q5T0J3 134 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 DCAF12L1Q5VU92 463 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 FYB2Q5VWT5 728 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 SPOPLQ6IQ16 392 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 CNNM4Q6P4Q7 775 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 DHRS13Q6UX07 377 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 CLEC20AQ6ZU45 233 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 TMPRSS12Q86WS5 348 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 CADM4Q8NFZ8 388 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 PARD3BQ8TEW8 1205 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 SORCS1Q8WY21 1168 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 SMARCD1Q96GM5 515 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 PIWIL1Q96J94 861 aaKnown RBP9.82□□□□□ -0.84
VCL-204ENST00000472585 FAM49BQ9NUQ9 324 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
VCL-204ENST00000472585 WDR35Q9P2L0 1181 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 THAP10Q9P2Z0 257 aaPredicted RBP9.82□□□□□ -0.84
VCL-204ENST00000472585 SCML2Q9UQR0 700 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 MTMR6Q9Y217 621 aa9.82□□□□□ -0.84
VCL-204ENST00000472585 ATMQ13315 3056 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 A0A1B0GVT2 93 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 GFRA2O00451 464 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 MAP3K7O43318 606 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 NEFLP07196 543 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 RARGP13631 454 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 ADORA2BP29275 332 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 TXLNAP40222 546 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 GRK6P43250 576 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 NASPP49321 788 aaPredicted RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 CSNK1EP49674 416 aaKnown RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 NCOA4Q13772 614 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 STARD3Q14849 445 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 INAVAQ3KP66 663 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 SHC4Q6S5L8 630 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 TMPRSS6Q8IU80 811 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 LINC00301Q8NCQ3 95 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 SYAP1Q96A49 352 aaPredicted RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 JAKMIP2Q96AA8 810 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 XPO6Q96QU8 1125 aaKnown RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 C7orf25Q9BPX7 421 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms