RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 C17orf99Q6UX52 265 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 ZDHHC17Q8IUH5 632 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 LRRC8CQ8TDW0 803 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 FAM111AQ96PZ2 611 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 MED10Q9BTT4 135 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 MYLK2Q9H1R3 596 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 KRT82Q9NSB4 513 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 DDX43Q9NXZ2 648 aaKnown RBP15.56■□□□□ 0.08
UBXN11-213ENST00000472155 TTC3P53804 2025 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 TRPM7Q96QT4 1865 aa15.56■□□□□ 0.08
UBXN11-213ENST00000472155 YJEFN3A6XGL0 299 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 E7ENQ6 273 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 F8W810 466 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 M0QYT0 321 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 XPO1O14980 1071 aaKnown RBP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 CHRNA1P02708 482 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 NPR3P17342 541 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 MRPS5P82675 430 aaKnown RBP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 CDC42EP1Q00587 391 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 BNIP1Q12981 228 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 RASA2Q15283 850 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 NBPF20Q3BBV1 942 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 GNASQ5JWF2 1037 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 LRRC6Q86X45 466 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 ZMIZ2Q8NF64 920 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 HASPINQ8TF76 798 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SIGLEC10Q96LC7 697 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SENP8Q96LD8 212 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 HNRNPABQ99729 332 aaKnown RBP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 PHACTR1Q9C0D0 580 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 KLC2Q9H0B6 622 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 AGO3Q9H9G7 860 aaKnown RBP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 NPHS2Q9NP85 383 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 C2orf71A6NGG8 1288 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 TRIM49D1C9J1S8 452 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 MT-ND3P03897 115 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 INHBAP08476 426 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 GMPRP36959 345 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SCNN1GP51170 649 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 TKTL1P51854 596 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SLC25A52Q3SY17 297 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 RFWD2Q8NHY2 731 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 HSFY1Q96LI6 401 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 QKIQ96PU8 341 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SMOQ99835 787 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 MECRQ9BV79 373 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 ULBP1Q9BZM6 244 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SENP1Q9P0U3 644 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 SEPT10Q9P0V9 454 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 KLHL14Q9P2G3 628 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 KANSL3Q9P2N6 904 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 DCTN4Q9UJW0 460 aa15.55■□□□□ 0.08
UBXN11-213ENST00000472155 HMX2A2RU54 273 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 WARSP23381 471 aaKnown RBP15.54■□□□□ 0.08
UBXN11-213ENST00000472155 HOXC8P31273 242 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 BSPRYQ5W0U4 402 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 CES4AQ5XG92 561 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 DEPDC1BQ8WUY9 529 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 PCED1BQ96HM7 432 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 ZNF236Q9UL36 1845 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 LPXNO60711 386 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 USP17L7P0C7H9 530 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 PNPLA4P41247 253 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 CAP1Q01518 475 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 AP1B1Q10567 949 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 HEATR6Q6AI08 1181 aaKnown RBP15.54■□□□□ 0.08
UBXN11-213ENST00000472155 PARP9Q8IXQ6 854 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 VPS52Q8N1B4 723 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 PDCD7Q8N8D1 485 aaKnown RBP15.54■□□□□ 0.08
UBXN11-213ENST00000472155 EDEM1Q92611 657 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 TTC17Q96AE7 1141 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 ERP27Q96DN0 273 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 TNIP3Q96KP6 325 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 OLFM3Q96PB7 478 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 TMEM237Q96Q45 408 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 ZNF395Q9H8N7 513 aaPredicted RBP15.54■□□□□ 0.08
UBXN11-213ENST00000472155 RXFP1Q9HBX9 757 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 FETUBQ9UGM5 382 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 STARD13Q9Y3M8 1113 aa15.54■□□□□ 0.08
UBXN11-213ENST00000472155 KCNK1O00180 336 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 GABRDO14764 452 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 NDC80O14777 642 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 TNPO2O14787 897 aaKnown RBP15.53■□□□□ 0.08
UBXN11-213ENST00000472155 GCATO75600 419 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 DGKIO75912 1065 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 KRT16P08779 473 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
UBXN11-213ENST00000472155 ETV4P43268 484 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 MAGEA3P43357 314 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 SLC18A1P54219 525 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 ANKRD20A2Q5SQ80 823 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 ANKRD20A1Q5TYW2 823 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 CES3Q6UWW8 571 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 CDKL3Q8IVW4 592 aaPredicted RBP15.53■□□□□ 0.08
UBXN11-213ENST00000472155 SLC7A14Q8TBB6 771 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 RNF139Q8WU17 664 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 C10orf82Q8WW14 230 aa15.53■□□□□ 0.08
UBXN11-213ENST00000472155 HTR3CQ8WXA8 447 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms