RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 STK3Q13188 491 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 GRM1Q13255 1194 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 DAG1Q14118 895 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 SAFBQ15424 915 aaKnown RBP eCLIP4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PROSER3Q2NL68 480 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TMEM119Q4V9L6 283 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 COBLL1Q53SF7 1204 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 DENND2CQ68D51 928 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 SFTPA1Q8IWL2 248 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 SRRM1Q8IYB3 904 aaKnown RBP4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TERB1Q8NA31 727 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 CYP2W1Q8TAV3 490 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 DPF1Q92782 380 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 ZBTB45Q96K62 511 aaPredicted RBP4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PRR25Q96S07 402 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 ZCWPW1Q9H0M4 648 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TERF2IPQ9NYB0 399 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 FLRT1Q9NZU1 646 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 ZNF212Q9UDV6 495 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 IQSEC2Q5JU85 1478 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 SLIT3O75094 1523 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 CES2O00748 559 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 THAP12O43422 761 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 FGAP02671 866 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 A1BGP04217 495 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PARP1P09874 1014 aaKnown RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 CD19P15391 556 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PPP2R1AP30153 589 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PIK3CBP42338 1070 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 HTRA4P83105 476 aaPredicted RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 TMEM63BQ5T3F8 832 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PRAMEF17Q5VTA0 474 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 KIRREL2Q6UWL6 708 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 DPY19L3Q6ZPD9 716 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 LTV1Q96GA3 475 aaPredicted RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 SNX18Q96RF0 628 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 MACROD1Q9BQ69 325 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PRKRIP1Q9H875 184 aaPredicted RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 DNAJB11Q9UBS4 358 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 NKX1-2Q9UD57 310 aaPredicted RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 CORO2BQ9UQ03 480 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 KNSTRNQ9Y448 316 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 NPHP3Q7Z494 1330 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 PARD3Q8TEW0 1356 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 COL3A1P02461 1466 aaPredicted RBP4.85□□□□□ -1.63
COL9A1-206ENST00000470652 NRAPQ86VF7 1730 aa4.85□□□□□ -1.63
COL9A1-206ENST00000470652 LMO7Q8WWI1 1683 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SBNO1A3KN83 1393 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 KIAA0232Q92628 1395 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 NINLQ9Y2I6 1382 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CGNL1Q0VF96 1302 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 MAP3K19Q56UN5 1328 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SMIM22K7EJ46 135 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 EXOC3O60645 756 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SNX2O60749 519 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 HGFP14210 728 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 TRIM27P14373 513 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 PHKG2P15735 406 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SRSF4Q08170 494 aaKnown RBP4.84□□□□□ -1.63
COL9A1-206ENST00000470652 FOXF2Q12947 444 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 HSP90AB2PQ58FF8 381 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 MORC1Q86VD1 984 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.63
COL9A1-206ENST00000470652 ATP11CQ8NB49 1132 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CTHRC1Q96CG8 243 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 IQCDQ96DY2 449 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 ZDHHC12Q96GR4 267 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SEMA4CQ9C0C4 833 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 SNX15Q9NRS6 342 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 TBC1D23Q9NUY8 699 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 FAM50BQ9Y247 325 aa4.84□□□□□ -1.63
COL9A1-206ENST00000470652 CAMTA1Q9Y6Y1 1673 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 TISP43B9A030 160 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 PRRT4C9JH25 899 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 POC1B-GALNT4F8VUJ3 575 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 UBE2Q2LH0YL09 131 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 EXOC5O00471 708 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 AREL1O15033 823 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 TMPRSS11DO60235 418 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 CELA2AP08217 269 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 CERS1P27544 350 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 IFIT5Q13325 482 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 RNASE12Q5GAN4 147 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 MANEALQ5VSG8 457 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 ZNF782Q6ZMW2 699 aaPredicted RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 GALNT4Q8N4A0 578 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 VGLL2Q8N8G2 317 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 PNLDC1Q8NA58 520 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 PJA1Q8NG27 643 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 LRRC59Q96AG4 307 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 COG3Q96JB2 828 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 ZC3H10Q96K80 434 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms