RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 BST2Q10589 180 aaKnown RBP25.63■■□□□ 1.69
PTCH1-210ENST00000468211 SLC23A3Q6PIS1 610 aa25.63■■□□□ 1.69
PTCH1-210ENST00000468211 SLC36A4Q6YBV0 504 aa25.63■■□□□ 1.69
PTCH1-210ENST00000468211 TFAP2BQ92481 460 aa25.63■■□□□ 1.69
PTCH1-210ENST00000468211 PIWIL1Q96J94 861 aaKnown RBP25.63■■□□□ 1.69
PTCH1-210ENST00000468211 TIGD1Q96MW7 591 aa25.63■■□□□ 1.69
PTCH1-210ENST00000468211 NUSAP1Q9BXS6 441 aaKnown RBP25.63■■□□□ 1.69
PTCH1-210ENST00000468211 STRIP2Q9ULQ0 834 aa25.63■■□□□ 1.69
PTCH1-210ENST00000468211 PCNX2A6NKB5 2137 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 O00370 1275 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 GFRA2O00451 464 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 IL12RB1P42701 662 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 FMO5P49326 533 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 SLC8A3P57103 927 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 SHC2P98077 582 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 ZNF33AQ06730 810 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 PKDCCQ504Y2 493 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 FAM217AQ8IXS0 508 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 CPXM2Q8N436 756 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 EDEM1Q92611 657 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 KAT5Q92993 513 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 ZSWIM1Q9BR11 485 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 LRRC4Q9HBW1 653 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 SFMBT1Q9UHJ3 866 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 MAN1B1Q9UKM7 699 aa25.62■■□□□ 1.69
PTCH1-210ENST00000468211 YJEFN3A6XGL0 299 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 E7ENQ6 273 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 CALCAP01258 141 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 VDRP11473 427 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 BMP6P22004 513 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 LMAN2Q12907 356 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 TRIP4Q15650 581 aaPredicted RBP25.61■■□□□ 1.69
PTCH1-210ENST00000468211 FUT11Q495W5 492 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 FMNL3Q8IVF7 1028 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 RBBP8NLQ8NC74 664 aaPredicted RBP25.61■■□□□ 1.69
PTCH1-210ENST00000468211 THAP10Q9P2Z0 257 aaPredicted RBP25.61■■□□□ 1.69
PTCH1-210ENST00000468211 HESX1Q9UBX0 185 aa25.61■■□□□ 1.69
PTCH1-210ENST00000468211 RNF225M0QZC1 329 aaPredicted RBP25.6■■□□□ 1.69
PTCH1-210ENST00000468211 ZNF217O75362 1048 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 CFIP05156 583 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 YWHAEP62258 255 aaKnown RBP25.6■■□□□ 1.69
PTCH1-210ENST00000468211 NUCB2P80303 420 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 ZNF252P-AS1Q0IIN9 211 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 ENPP2Q13822 863 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 ST3GAL2Q16842 350 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 BSPRYQ5W0U4 402 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 TMEM215Q68D42 235 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 KIAA1324Q6UXG2 1013 aaKnown RBP25.6■■□□□ 1.69
PTCH1-210ENST00000468211 SORCS1Q8WY21 1168 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 PLD4Q96BZ4 506 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 CACNA1EQ15878 2313 aa25.6■■□□□ 1.69
PTCH1-210ENST00000468211 PSMA7O14818 248 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 ZBTB24O43167 697 aaPredicted RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 CSRP1P21291 193 aaKnown RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 TBXAS1P24557 533 aaPredicted RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 DUOXA1Q1HG43 343 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 TTI2Q6NXR4 508 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 TMEM270Q6UE05 265 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 TRIML1Q8N9V2 468 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 DEFB124Q8NES8 71 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 LMO3Q8TAP4 145 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 DDI1Q8WTU0 396 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 KCTD13Q8WZ19 329 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 DHTKD1Q96HY7 919 aaPredicted RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 HSPA12BQ96MM6 686 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 IPO9Q96P70 1041 aaKnown RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 MKRN2Q9H000 416 aaKnown RBP25.59■■□□□ 1.69
PTCH1-210ENST00000468211 CAPN10Q9HC96 672 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 SLC6A14Q9UN76 642 aa25.59■■□□□ 1.69
PTCH1-210ENST00000468211 PIK3R2O00459 728 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 MSI1O43347 362 aaKnown RBP25.58■■□□□ 1.69
PTCH1-210ENST00000468211 TSPAN3O60637 253 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 LCP1P13796 627 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 HOXD12P35452 270 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 DPP6P42658 865 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 RGS7P49802 495 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 ZNF234Q14588 700 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 KLHL10Q6JEL2 608 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 LCLAT1Q6UWP7 414 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 ANKS1BQ7Z6G8 1248 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 SIX6OS1Q8N1H7 587 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 CEP63Q96MT8 703 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 METTL14Q9HCE5 456 aaKnown RBP25.58■■□□□ 1.69
PTCH1-210ENST00000468211 OLA1Q9NTK5 396 aaKnown RBP25.58■■□□□ 1.69
PTCH1-210ENST00000468211 ELOVL2Q9NXB9 296 aa25.58■■□□□ 1.69
PTCH1-210ENST00000468211 MUC22E2RYF6 1773 aaPredicted RBP25.58■■□□□ 1.69
PTCH1-210ENST00000468211 PPP1R3GB7ZBB8 358 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 TOP3BO95985 862 aaKnown RBP25.57■■□□□ 1.68
PTCH1-210ENST00000468211 CYBBP04839 570 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 SERPINF2P08697 491 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 SETSIPP0DME0 302 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 CEACAM1P13688 526 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 PRKCHP24723 683 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 HOXD9P28356 352 aaPredicted RBP25.57■■□□□ 1.68
PTCH1-210ENST00000468211 DAOAP59103 153 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 BECN1Q14457 450 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 PMF1Q6P1K2 205 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 OR2I1PQ8NGU4 316 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 SLC35F5Q8WV83 523 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 ZNF419Q96HQ0 510 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms