RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CR2P20023 1033 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 LSSP48449 732 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 TRAPPC10P48553 1259 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SLC5A3P53794 718 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 DAB2P98082 770 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 GTF2BQ00403 316 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 E2F1Q01094 437 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 BNIP3Q12983 259 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 EIF4HQ15056 248 aaKnown RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 HYIQ5T013 277 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SNX30Q5VWJ9 437 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 DTHD1Q6ZMT9 781 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 CXorf38Q8TB03 319 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SORCS1Q8WY21 1168 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SAAL1Q96ER3 474 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 HPDLQ96IR7 371 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 KLF16Q9BXK1 252 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SGK2Q9HBY8 427 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 ASCL3Q9NQ33 180 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 STARD5Q9NSY2 213 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 FBXO10Q9UK96 956 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 BOD1L1Q8NFC6 3051 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 A0A1W2PPC4 97 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 CSO75390 466 aaKnown RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 CD38P28907 300 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ZNF131P52739 623 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 IRX6P78412 446 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 TLE1Q04724 770 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 SERINC3Q13530 473 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 CAMK2GQ13555 558 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 POSTNQ15063 836 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ANKRD1Q15327 319 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 IL17AQ16552 155 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 FNDC3BQ53EP0 1204 aaKnown RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 SGO2Q562F6 1265 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 C3orf38Q5JPI3 329 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 SFMBT2Q5VUG0 894 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 OXR1Q8N573 874 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 KCTD17Q8N5Z5 321 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ZNF366Q8N895 744 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 OR6B3Q8NGW1 331 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 CCDC97Q96F63 343 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ANKRD36BP1Q96IX9 119 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 C8orf76Q96K31 380 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 MRPL45Q9BRJ2 306 aaKnown RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 DPEP3Q9H4B8 488 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ELOVL2Q9NXB9 296 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ANKRD17O75179 2603 aaKnown RBP10.79□□□□□ -0.68
HDAC3-203ENST00000467533 ATP8B3O60423 1300 aa10.79□□□□□ -0.68
HDAC3-203ENST00000467533 SPTAN1Q13813 2472 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 LRRK2Q5S007 2527 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 TBX18O95935 607 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 PENKP01210 267 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 ZDHHC11BP0C7U3 371 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 PTPN1P18031 435 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 RBMS1P29558 406 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 DDIT3P35638 169 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 ATP5C1P36542 298 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 GNL1P36915 607 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 PRPHP41219 470 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 ZBTB16Q05516 673 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 ME3Q16798 604 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 ZSWIM2Q8NEG5 633 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 GANCQ8TET4 914 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 P2RY11Q96G91 374 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 FIZ1Q96SL8 496 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 MED10Q9BTT4 135 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 B3GNT5Q9BYG0 378 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 DMAP1Q9NPF5 467 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 TLR8Q9NR97 1041 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 NCKAP1Q9Y2A7 1128 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
HDAC3-203ENST00000467533 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
HDAC3-203ENST00000467533 GOLGA8IPA6NC78 632 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 GOLGA8JA6NMD2 632 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 SDC3O75056 442 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 TNNC2P02585 160 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 NXPH1P58417 271 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 LINC00303Q3SY05 128 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 TMEM119Q4V9L6 283 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 HS1BP3Q53T59 392 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 SLC45A4Q5BKX6 768 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 FYB2Q5VWT5 728 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 Q6ZNB5 142 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 FAM35AQ86V20 835 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 B3GALNT2Q8NCR0 500 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 PIWIL1Q96J94 861 aaKnown RBP10.77□□□□□ -0.69
HDAC3-203ENST00000467533 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms