RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TOGARAM2Q6ZUX3 1019 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 CACNA2D4Q7Z3S7 1137 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 TAC4Q86UU9 113 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 ERICH1Q86X53 443 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 XYLT1Q86Y38 959 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 TMEM25Q86YD3 366 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 MAML2Q8IZL2 1156 aaPredicted RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 MSANTD4Q8NCY6 345 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 EZH1Q92800 747 aaPredicted RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 NT5C3BQ969T7 300 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 C18orf8Q96DM3 657 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 P2RY11Q96G91 374 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 FCRL2Q96LA5 508 aaPredicted RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 SERPINB11Q96P15 392 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 AGPAT1Q99943 283 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 PRMT8Q9NR22 394 aaPredicted RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 WDR35Q9P2L0 1181 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 NDRG2Q9UN36 371 aaKnown RBP9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 TLR6Q9Y2C9 796 aa9.88□□□□□ -0.83
SDCCAG3-208ENST00000466579 LRRC53A6NM62 1247 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 CHURC1-FNTBB4DL54 471 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 IRAK2O43187 625 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 MSI1O43347 362 aaKnown RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 EGFP01133 1207 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 HMBSP08397 361 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 TDGF1P13385 188 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 NOS2P35228 1153 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 HARS2P49590 506 aaKnown RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 PTPN5P54829 565 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 CLEC16AQ2KHT3 1053 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 FYB2Q5VWT5 728 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 E4F1Q66K89 784 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 NUGGCQ68CJ6 796 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 OR6B2Q6IFH4 312 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 BNIPLQ7Z465 357 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 C12orf40Q86WS4 652 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 DENND1CQ8IV53 801 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 C1orf210Q8IVY1 113 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 UNC45BQ8IWX7 931 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 SPEM1Q8N4L4 309 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 CPA5Q8WXQ8 436 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 SYN2Q92777 582 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 NELL1Q92832 810 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 FAM149B1Q96BN6 582 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 PGAP3Q96FM1 320 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 PDCL3Q9H2J4 239 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 TMEM51Q9NW97 253 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 IFNKQ9P0W0 207 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 TMEM59LQ9UK28 342 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 FBXO4Q9UKT5 387 aa9.87□□□□□ -0.83
SDCCAG3-208ENST00000466579 TCRBV5S1A1TA0A578 114 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 KCNU1A8MYU2 1149 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 K7EQS6 105 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 TULP3O75386 442 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 TRUB2O95900 331 aaKnown RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 CISD3P0C7P0 127 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 TYRP14679 529 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 HOXA6P31267 233 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 MATKP42679 507 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 TNFRSF4P43489 277 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC6A11P48066 632 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 TBX4P57082 545 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 PITX1P78337 314 aaPredicted RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ZBED6P86452 979 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 CDK17Q00537 523 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 MESP2Q0VG99 397 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 MTAPQ13126 283 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ANGPT1Q15389 498 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ZNF528Q3MIS6 628 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 DCAF6Q58WW2 860 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 FAM133BQ5BKY9 247 aaKnown RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ADGRF1Q5T601 910 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 SFMBT2Q5VUG0 894 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 OTUD1Q5VV17 481 aaPredicted RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 SARM1Q6SZW1 724 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 MON1BQ7L1V2 547 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 DEFB106AQ8N104 65 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 CCDC26Q8TAB7 109 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 PNKPQ96T60 521 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 NPY6RQ99463 290 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 XPO4Q9C0E2 1151 aaKnown RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 SYNCQ9H7C4 482 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 RBM12Q9NTZ6 932 aaKnown RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 RAPGEFL1Q9UHV5 662 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 CAPN11Q9UMQ6 739 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC27A6Q9Y2P4 619 aa9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
SDCCAG3-208ENST00000466579 CAPN9O14815 690 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 CBFA2T2O43439 604 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ACSL4O60488 711 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms