RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DDX3XO00571 662 aaKnown RBP eCLIP21.17■□□□□ 0.983e-14■□□□□ 9.2
SKA3-205ENST00000465471 SKILP12757 684 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 TNFAIP3P21580 790 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 NOS2P35228 1153 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 OPRD1P41143 372 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 MATKP42679 507 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 TBX4P57082 545 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 AMPD2Q01433 879 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 NUGGCQ68CJ6 796 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 ACAD10Q6JQN1 1059 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 DENND1CQ8IV53 801 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 CPXM2Q8N436 756 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 ADAM32Q8TC27 787 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 CLDN23Q96B33 292 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 DNAJC7Q99615 494 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 TRIM5Q9C035 493 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 SEPT11Q9NVA2 429 aaKnown RBP21.17■□□□□ 0.98
SKA3-205ENST00000465471 TAS2R14Q9NYV8 317 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 ADAM22Q9P0K1 906 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 WDR35Q9P2L0 1181 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 SIT1Q9Y3P8 196 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 FAM170BA6NMN3 283 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 SERPING1P05155 500 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 CALB1P05937 261 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 ADH5P11766 374 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 AVPR2P30518 371 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 EIF2DP41214 584 aaKnown RBP21.16■□□□□ 0.98
SKA3-205ENST00000465471 HARS2P49590 506 aaKnown RBP21.16■□□□□ 0.98
SKA3-205ENST00000465471 CDK17Q00537 523 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 TBX2Q13207 712 aaPredicted RBP21.16■□□□□ 0.98
SKA3-205ENST00000465471 UBXN2BQ14CS0 331 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 TMEM196Q5HYL7 178 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 NAIF1Q69YI7 327 aaPredicted RBP21.16■□□□□ 0.98
SKA3-205ENST00000465471 TRNP1Q6NT89 227 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 PPP1R2P3Q6NXS1 205 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 TMEM25Q86YD3 366 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 UNC45BQ8IWX7 931 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 ETFBKMTQ8IXQ9 262 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 AZIN2Q96A70 460 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 P2RY11Q96G91 374 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 NPY6RQ99463 290 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 ADAM33Q9BZ11 813 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 RRN3Q9NYV6 651 aa21.16■□□□□ 0.98
SKA3-205ENST00000465471 GOLGA8SH3BPF8 625 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 CHRNB1P11230 501 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 GZMAP12544 262 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 CHKAP35790 457 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 FLT3P36888 993 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 RPS9P46781 194 aaKnown RBP21.15■□□□□ 0.98
SKA3-205ENST00000465471 GAD2Q05329 585 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 CCINQ13939 588 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 PON2Q15165 354 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 BNIPLQ7Z465 357 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 DRC7Q8IY82 874 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 MCOLN2Q8IZK6 566 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 C3orf20Q8ND61 904 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 PGAP3Q96FM1 320 aaPredicted RBP21.15■□□□□ 0.98
SKA3-205ENST00000465471 MRFAP1L1Q96HT8 127 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.15■□□□□ 0.98
SKA3-205ENST00000465471 CALCOCO1Q9P1Z2 691 aa21.15■□□□□ 0.98
SKA3-205ENST00000465471 STK25O00506 426 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 MFAP3LO75121 409 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 PENKP01210 267 aaPredicted RBP21.14■□□□□ 0.97
SKA3-205ENST00000465471 PLEKP08567 350 aaPredicted RBP21.14■□□□□ 0.97
SKA3-205ENST00000465471 ZNF75DP51815 510 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 FSTL4Q6MZW2 842 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 WDR59Q6PJI9 974 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 C12orf40Q86WS4 652 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 CD101Q93033 1021 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 VCPIP1Q96JH7 1222 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 P2RY13Q9BPV8 354 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 FAM204AQ9H8W3 233 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 FBRSL1Q9HCM7 1045 aaKnown RBP21.14■□□□□ 0.97
SKA3-205ENST00000465471 METTL5Q9NRN9 209 aaKnown RBP21.14■□□□□ 0.97
SKA3-205ENST00000465471 DDIT4Q9NX09 232 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 ARHGAP20Q9P2F6 1191 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 STAP1Q9ULZ2 295 aa21.14■□□□□ 0.97
SKA3-205ENST00000465471 NDRG2Q9UN36 371 aaKnown RBP21.14■□□□□ 0.97
SKA3-205ENST00000465471 CACNG3O60359 315 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 DCNP07585 359 aaKnown RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 TFE3P19532 575 aaPredicted RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 MAGEA9P43362 315 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 GALK1P51570 392 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 NUBP1P53384 320 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 RNASE9P60153 205 aaKnown RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 SLC25A52Q3SY17 297 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 TDRD12Q587J7 1177 aaKnown RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 FAM133BQ5BKY9 247 aaKnown RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 PPP1R15BQ5SWA1 713 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 ADGRF1Q5T601 910 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 FYB2Q5VWT5 728 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 PHTF2Q8N3S3 785 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 OR8K1Q8NGG5 319 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 EZH1Q92800 747 aaPredicted RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 IRX2Q9BZI1 471 aaPredicted RBP21.13■□□□□ 0.97
SKA3-205ENST00000465471 ABHD10Q9NUJ1 306 aa21.13■□□□□ 0.97
SKA3-205ENST00000465471 KCNU1A8MYU2 1149 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 NCAM2O15394 837 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 ACSL4O60488 711 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 GBP1P32455 592 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms