RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TNFRSF10BO14763 440 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 AXIN1O15169 862 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 SKILP12757 684 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 DESP17661 470 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 DRD1P21728 446 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 GJA4P35212 333 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 RPL34P49207 117 aaKnown RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 KIF11P52732 1056 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 NOMO3P69849 1222 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 CENPCQ03188 943 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 MTF1Q14872 753 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 HGSNATQ68CP4 663 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 NAIF1Q69YI7 327 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 PMF1Q6P1K2 205 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 CCDC186Q7Z3E2 898 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 ZNF571Q7Z3V5 609 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 KBTBD6Q86V97 674 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 PASD1Q8IV76 773 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 ZMIZ2Q8NF64 920 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 C18orf8Q96DM3 657 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 SLC22A12Q96S37 553 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 CYP2S1Q96SQ9 504 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 ARRDC1-AS1Q9H2J1 176 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 ECT2Q9H8V3 914 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 TRPC7Q9HCX4 862 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 POLR3BQ9NW08 1133 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
CPSF4-209ENST00000465132 IL37Q9NZH6 218 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 GREB1Q4ZG55 1949 aa18.25■□□□□ 0.51
CPSF4-209ENST00000465132 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 TRAV19A0A0A6YYK7 116 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 FAM92AA1XBS5 289 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 ANKRD62A6NC57 917 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 RTN2O75298 545 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 BEST1O76090 585 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 EPN2O95208 641 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 USP17L7P0C7H9 530 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 MYBL1P10243 752 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 CHRNB2P17787 502 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 CACNA2D1P54289 1103 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
CPSF4-209ENST00000465132 USP4Q13107 963 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 ZNF77Q15935 545 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 SLC18A3Q16572 532 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 FBXO43Q4G163 708 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 EFHC1Q5JVL4 640 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 ACAD10Q6JQN1 1059 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 PHF13Q86YI8 300 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-209ENST00000465132 CPA6Q8N4T0 437 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 CAMKK1Q8N5S9 505 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 OSCP1Q8WVF1 389 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 BAG1Q99933 345 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-209ENST00000465132 NHEJ1Q9H9Q4 299 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-209ENST00000465132 ADAMTS1Q9UHI8 967 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 USP3Q9Y6I4 520 aa18.24■□□□□ 0.51
CPSF4-209ENST00000465132 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
CPSF4-209ENST00000465132 OBSL1O75147 1896 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 HHLA1C9JL84 531 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 CALCAP01258 141 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 CKMP06732 381 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 GLI1P08151 1106 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 RALAP11233 206 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 UNGP13051 313 aaPredicted RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 LCP1P13796 627 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 SCNN1AP37088 669 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 EIF4A3P38919 411 aaKnown RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 RGS7P49802 495 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ADIGQ0VDE8 80 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 IFRD2Q12894 506 aaPredicted RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 SF3A2Q15428 464 aaKnown RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 SPA17Q15506 151 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 AASDHQ4L235 1098 aaPredicted RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 PM20D1Q6GTS8 502 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ARL14EPQ8N8R7 260 aaPredicted RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 TTC16Q8NEE8 873 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 OLA1Q9NTK5 396 aaKnown RBP18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ASNSD1Q9NWL6 643 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ADAM22Q9P0K1 906 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 WNT6Q9Y6F9 365 aa18.23■□□□□ 0.51
CPSF4-209ENST00000465132 TPRP12270 2363 aaKnown RBP18.22■□□□□ 0.51
CPSF4-209ENST00000465132 C2orf78A6NCI8 922 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 ZNF806P0C7X5 589 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 MMP8P22894 467 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 GABRB2P47870 512 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 IFNAR2P48551 515 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 TUBP50607 506 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 LIMK1P53667 647 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 TAF10Q12962 218 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 CCDC6Q16204 474 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 EML3Q32P44 896 aa18.22■□□□□ 0.51
CPSF4-209ENST00000465132 E4F1Q66K89 784 aaPredicted RBP18.22■□□□□ 0.51
CPSF4-209ENST00000465132 C12orf50Q8NA57 414 aaPredicted RBP18.22■□□□□ 0.51
CPSF4-209ENST00000465132 SLC30A5Q8TAD4 765 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms