RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 UBE2TQ9NPD8 197 aaPredicted RBP9.27□□□□□ -0.93
LDB1-203ENST00000461873 ZDHHC4Q9NPG8 344 aa9.27□□□□□ -0.93
LDB1-203ENST00000461873 SLC12A6Q9UHW9 1150 aa9.27□□□□□ -0.93
LDB1-203ENST00000461873 CEP83Q9Y592 693 aa9.27□□□□□ -0.93
LDB1-203ENST00000461873 BCLAF3A2AJT9 711 aaKnown RBP9.26□□□□□ -0.93
LDB1-203ENST00000461873 PMM2O15305 246 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 THAP12O43422 761 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 GDF9O60383 454 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 CFIP05156 583 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 NCAM1P13591 858 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 RDXP35241 583 aaKnown RBP9.26□□□□□ -0.93
LDB1-203ENST00000461873 LIMK1P53667 647 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 ST8SIA6P61647 398 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 GCNT1Q02742 428 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 EIF4HQ15056 248 aaKnown RBP9.26□□□□□ -0.93
LDB1-203ENST00000461873 GAB4Q2WGN9 574 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 EGFLAMQ63HQ2 1017 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 PM20D1Q6GTS8 502 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 TTI2Q6NXR4 508 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SERPINA13PQ6UXR4 307 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 GBP6Q6ZN66 633 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 CPXM2Q8N436 756 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 HDDC3Q8N4P3 179 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 IPO4Q8TEX9 1081 aaKnown RBP9.26□□□□□ -0.93
LDB1-203ENST00000461873 IRGQQ8WZA9 623 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 RNF34Q969K3 372 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 HSFY1Q96LI6 401 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 MED15Q96RN5 788 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SLC2A11Q9BYW1 496 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 MIS12Q9H081 205 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SLC32A1Q9H598 525 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SYNCQ9H7C4 482 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 TMEM9BQ9NQ34 198 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SFMBT1Q9UHJ3 866 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 RWDD2AQ9UIY3 292 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 AGO1Q9UL18 857 aaKnown RBP9.26□□□□□ -0.93
LDB1-203ENST00000461873 GVINP1Q7Z2Y8 2422 aa9.26□□□□□ -0.93
LDB1-203ENST00000461873 SPTBN4Q9H254 2564 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 EML5Q05BV3 1969 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 MED19A0JLT2 244 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 MEI4A8MW99 385 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 GOLGA6L22H0YM25 854 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 O00370 1275 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PIK3R2O00459 728 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 TSPAN3O60637 253 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 LETM1O95202 739 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 MOCS3O95396 460 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 LATS1O95835 1130 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 APOEP02649 317 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 ATP5BP06576 529 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 SYPP08247 313 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 TGM1P22735 817 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 BRD2P25440 801 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 OXTRP30559 389 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 GNA15P30679 374 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 HOXC13P31276 330 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 P2RY2P41231 377 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PGFP49763 221 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 TBX4P57082 545 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 MCCD1P59942 119 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 SFSWAPQ12872 951 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 NFKBIBQ15653 356 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 FNDC3BQ53EP0 1204 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 TRIM61Q5EBN2 209 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 WDR45BQ5MNZ6 344 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 ADGRF1Q5T601 910 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 Q6ZNB5 142 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 TOGARAM2Q6ZUX3 1019 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 SYT12Q8IV01 421 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 MLKLQ8NB16 471 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 WFIKKN2Q8TEU8 576 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PRCCQ92733 491 aaPredicted RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 FOXJ1Q92949 421 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 WBP2Q969T9 261 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 ERLEC1Q96DZ1 483 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 SERPINB11Q96P15 392 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 INTS2Q9H0H0 1204 aaKnown RBP9.25□□□□□ -0.93
LDB1-203ENST00000461873 SMOC1Q9H4F8 434 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 PRDM16Q9HAZ2 1276 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 CACNA2D2Q9NY47 1150 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 TJP2Q9UDY2 1190 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 SUSD2Q9UGT4 822 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 CYP8B1Q9UNU6 501 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.25□□□□□ -0.93
LDB1-203ENST00000461873 SLC27A6Q9Y2P4 619 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 STON1Q9Y6Q2 735 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 KIAA1549LQ6ZVL6 1849 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 NUP205Q92621 2012 aa9.25□□□□□ -0.93
LDB1-203ENST00000461873 YJEFN3A6XGL0 299 aa9.24□□□□□ -0.93
LDB1-203ENST00000461873 C4orf47A7E2U8 309 aa9.24□□□□□ -0.93
LDB1-203ENST00000461873 E7ENQ6 273 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms