RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 SMOC1Q9H4F8 434 aa18.21■□□□□ 0.51
MRPL28-207ENST00000461550 SIX2Q9NPC8 291 aa18.21■□□□□ 0.51
MRPL28-207ENST00000461550 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
MRPL28-207ENST00000461550 CYTH4Q9UIA0 394 aa18.21■□□□□ 0.51
MRPL28-207ENST00000461550 CLEC4EQ9ULY5 219 aa18.21■□□□□ 0.51
MRPL28-207ENST00000461550 HBS1LQ9Y450 684 aaKnown RBP18.21■□□□□ 0.51
MRPL28-207ENST00000461550 SPTBN2O15020 2390 aa18.21■□□□□ 0.51
MRPL28-207ENST00000461550 ALDH1A2O94788 518 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 PNMA6AP0CW24 399 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 PRKCSHP14314 528 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 BCKDHBP21953 392 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 HARS2P49590 506 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 LMNB2Q03252 620 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 USP39Q53GS9 565 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 FAM114A1Q8IWE2 563 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 IRGQQ8WZA9 623 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 SAMSN1Q9NSI8 373 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 DACH1Q9UI36 760 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 GTPBP10A4D1E9 387 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 LRP3O75074 770 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 EPN2O95208 641 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 HOXB2P14652 356 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 ERCC5P28715 1186 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 NTSR1P30989 418 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 SF3A2Q15428 464 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 CSRP2Q16527 193 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 GEN1Q17RS7 908 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 MIIPQ5JXC2 388 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 MSANTD2Q6P1R3 559 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 PRR23CQ6ZRP0 262 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 CHPFQ8IZ52 775 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 PGBD3Q8N328 593 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 CPXM2Q8N436 756 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 FRMD1Q8N878 549 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 DDI1Q8WTU0 396 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 SHC3Q92529 594 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 GOLGA1Q92805 767 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 FAM149B1Q96BN6 582 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 ZC3H10Q96K80 434 aaKnown RBP18.2■□□□□ 0.5
MRPL28-207ENST00000461550 TUBGCP2Q9BSJ2 902 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 CACNA2D2Q9NY47 1150 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 TJP2Q9UDY2 1190 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 FBXO10Q9UK96 956 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 STARD13Q9Y3M8 1113 aa18.2■□□□□ 0.5
MRPL28-207ENST00000461550 NUP205Q92621 2012 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 E5RJQ4 531 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
MRPL28-207ENST00000461550 MED7O43513 233 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 GDF9O60383 454 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 FBXO21O94952 628 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 CYBBP04839 570 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 FYNP06241 537 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 ELF2Q15723 593 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 VWA3BQ502W6 1294 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 KIAA1211LQ6NV74 962 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 TRMT11Q7Z4G4 463 aaKnown RBP18.19■□□□□ 0.5
MRPL28-207ENST00000461550 PASD1Q8IV76 773 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 ADAM32Q8TC27 787 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 RAD54BQ9Y620 910 aa18.19■□□□□ 0.5
MRPL28-207ENST00000461550 GON4LQ3T8J9 2241 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.18■□□□□ 0.5
MRPL28-207ENST00000461550 A0A1W2PQF6 199 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 KCNJ18B7U540 433 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 NCAM1P13591 858 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 SGSHP51688 502 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 KCNJ12Q14500 433 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 OLIG1Q8TAK6 271 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 LOXL4Q96JB6 756 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 DLL3Q9NYJ7 618 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 DNAJC12Q9UKB3 198 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 CDV3Q9UKY7 258 aaKnown RBP18.18■□□□□ 0.5
MRPL28-207ENST00000461550 NAALADL1Q9UQQ1 740 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 SLC27A6Q9Y2P4 619 aa18.18■□□□□ 0.5
MRPL28-207ENST00000461550 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 SYCE3A1L190 88 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 PAPSS1O43252 624 aaPredicted RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 GABRG2P18507 467 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 HOXD9P28356 352 aaPredicted RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 MPLP40238 635 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 RPL34P49207 117 aaKnown RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 TBX4P57082 545 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 CREB5Q02930 508 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 TYRO3Q06418 890 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 PUM1Q14671 1186 aaKnown RBP eCLIP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 STX1AQ16623 288 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 SYPL2Q5VXT5 272 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 RFWD3Q6PCD5 774 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 DQX1Q8TE96 717 aaKnown RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 PIWIL1Q96J94 861 aaKnown RBP18.17■□□□□ 0.5
MRPL28-207ENST00000461550 FAM81BQ96LP2 452 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 SLC4A5Q9BY07 1137 aa18.17■□□□□ 0.5
MRPL28-207ENST00000461550 SLC6A17Q9H1V8 727 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms