RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TBC1D3HP0C7X1 549 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TMIGD3P0DMS9 266 aaPredicted RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 PEPDP12955 493 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 XBP1P17861 261 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TGM1P22735 817 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 DIO1P49895 249 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 SEC24CP53992 1094 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 EEFSECP57772 596 aaKnown RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 RBM6P78332 1123 aaKnown RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TXNL4AP83876 142 aaKnown RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 CCDC15Q0P6D6 951 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 G3BP1Q13283 466 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 CBFBQ13951 182 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 DLGAP5Q15398 846 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TBRG1Q3YBR2 411 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 PCID2Q5JVF3 399 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TBC1D3GQ6DHY5 549 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TBC1D3CQ6IPX1 549 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 ACSM6Q6P461 480 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 ANKS1BQ7Z6G8 1248 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TBC1D3Q8IZP1 549 aaPredicted RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 NAXEQ8NCW5 288 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 ACTRT2Q8TDY3 377 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 HERVK_113Q902F9 699 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 ADAMTS5Q9UNA0 930 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 RRP7AQ9Y3A4 280 aaKnown RBP6.19□□□□□ -1.42
CCDC50-203ENST00000460064 LMTK3Q96Q04 1460 aa6.19□□□□□ -1.42
CCDC50-203ENST00000460064 TISP43B9A030 160 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 NPIPB8E9PQR5 432 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 H0YIZ8 118 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 TJP3O95049 919 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 TFRCP02786 760 aaKnown RBP6.18□□□□□ -1.42
CCDC50-203ENST00000460064 PCSK6P29122 969 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 ADRA1BP35368 520 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 RPL15P61313 204 aaKnown RBP6.18□□□□□ -1.42
CCDC50-203ENST00000460064 PSG6Q00889 435 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 UBE3AQ05086 875 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 LMAN2Q12907 356 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 INTS11Q5TA45 600 aaKnown RBP6.18□□□□□ -1.42
CCDC50-203ENST00000460064 DGAT2L7PQ6IED9 249 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 KIRREL2Q6UWL6 708 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 C16orf89Q6UX73 402 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 Q6YL49 198 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 SYNE3Q6ZMZ3 975 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 SFTPA1Q8IWL2 248 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 ESX1Q8N693 406 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 C12orf76Q8N812 135 aaPredicted RBP6.18□□□□□ -1.42
CCDC50-203ENST00000460064 NPIPB3Q92617 1050 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 FSD1LQ9BXM9 530 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 ABHD16BQ9H3Z7 469 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 SLC13A4Q9UKG4 626 aa6.18□□□□□ -1.42
CCDC50-203ENST00000460064 TRPC5Q9UL62 973 aaPredicted RBP6.18□□□□□ -1.42
CCDC50-203ENST00000460064 FAM90A20PA6NIJ5 464 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 PRRT4C9JH25 899 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 NKX2-8O15522 239 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 EPB41L2O43491 1005 aaKnown RBP6.17□□□□□ -1.42
CCDC50-203ENST00000460064 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
CCDC50-203ENST00000460064 CYP21A2P08686 494 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 ELFN1P0C7U0 828 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 CXCR5P32302 372 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 GRK5P34947 590 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 MCM2P49736 904 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 CCT8P50990 548 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TLE2Q04725 743 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 FOXI1Q12951 378 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TRPC3Q13507 836 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 FAM187BQ17R55 369 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TMED8Q6PL24 325 aaPredicted RBP6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TMTC1Q8IUR5 882 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 PPM1MQ96MI6 270 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 SEC62Q99442 399 aaKnown RBP6.17□□□□□ -1.42
CCDC50-203ENST00000460064 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 WASH6PQ9NQA3 447 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TMLHEQ9NVH6 421 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 TFCP2L1Q9NZI6 479 aa6.17□□□□□ -1.42
CCDC50-203ENST00000460064 AGAP5A6NIR3 686 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 STX16-NPEPL1H3BU86 382 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 STX16O14662 325 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 SEPT4O43236 478 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
CCDC50-203ENST00000460064 ZNF202O95125 648 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 C1RP00736 705 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 ADH4P08319 380 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 FPR3P25089 353 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 ITPKBP27987 946 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 GALNSP34059 522 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
CCDC50-203ENST00000460064 GPC5P78333 572 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 CHRNDQ07001 517 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 DDX10Q13206 875 aaKnown RBP6.16□□□□□ -1.42
CCDC50-203ENST00000460064 ANKRD1Q15327 319 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 FAM153CQ494X1 144 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 CTXN3Q4LDR2 81 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 LRRC24Q50LG9 513 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms