RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	NFATC1	O95644	943 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	CHRNB1	P11230	501 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	AVPR2	P30518	371 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	HOXC13	P31276	330 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	SLC6A4	P31645	630 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	GALK1	P51570	392 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ATXN1	P54253	815 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	GSC	P56915	257 aa	Predicted RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	TBX4	P57082	545 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	RNASE9	P60153	205 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	GAS6	Q14393	721 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	UBXN2B	Q14CS0	331 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	FAM133B	Q5BKY9	247 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	PPP1R15B	Q5SWA1	713 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ARTN	Q5T4W7	220 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ASTL	Q6HA08	431 aa	Predicted RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ACAD10	Q6JQN1	1059 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	TOGARAM2	Q6ZUX3	1019 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	TMC6	Q7Z403	805 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	RALGPS2	Q86X27	583 aa	Predicted RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZDHHC17	Q8IUH5	632 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ETFBKMT	Q8IXQ9	262 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	MCOLN2	Q8IZK6	566 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	PLD4	Q96BZ4	506 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	TRIM5	Q9C035	493 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	SPHK2	Q9NRA0	654 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	C2orf42	Q9NWW7	574 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	ADAM22	Q9P0K1	906 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	TBC1D14	Q9P2M4	693 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	STOML2	Q9UJZ1	356 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	LSM7	Q9UK45	103 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	CLEC4E	Q9ULY5	219 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	LUC7L2	Q9Y383	392 aa	Known RBP	10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783	KMT2E	Q8IZD2	1858 aa		10.69	□□□□□ -0.7
MRPL55-223	ENST00000459783		A0A087X0T9	212 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	FAM170B	A6NMN3	283 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TMCO5B	A8MYB1	307 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	KCNU1	A8MYU2	1149 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	SLC9A3R1	O14745	358 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	HOXC11	O43248	304 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ATMIN	O43313	823 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	MFAP3L	O75121	409 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	EGF	P01133	1207 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	FAM228B	P0C875	321 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ADH5	P11766	374 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TNFAIP3	P21580	790 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	RRM1	P23921	792 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	NOS2	P35228	1153 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	MATK	P42679	507 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	NSF	P46459	744 aa	Known RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	CLCN5	P51795	746 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ADK	P55263	362 aa	Known RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	OGDH	Q02218	1023 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	RING1	Q06587	406 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	C1QBP	Q07021	282 aa	Known RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	NNT	Q13423	1086 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	CCIN	Q13939	588 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ASTE1	Q2TB18	679 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TDRD12	Q587J7	1177 aa	Known RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TMEM196	Q5HYL7	178 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	SH3PXD2A	Q5TCZ1	1133 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	FYB2	Q5VWT5	728 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	PKN3	Q6P5Z2	889 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZNF852	Q6ZMS4	543 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783		Q6ZS52	159 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TPGS1	Q6ZTW0	290 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	GOLGA1	Q92805	767 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	BHMT	Q93088	406 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	CLDN23	Q96B33	292 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	OTUB2	Q96DC9	234 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	IQCD	Q96DY2	449 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	SHD	Q96IW2	340 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	CFAP57	Q96MR6	1250 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	SERPINB11	Q96P15	392 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TBCB	Q99426	244 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	MFSD1	Q9H3U5	465 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TMPRSS4	Q9NRS4	437 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	PIGV	Q9NUD9	493 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	PLK2	Q9NYY3	685 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	MARK1	Q9P0L2	795 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ADAMTS1	Q9UHI8	967 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	HCN2	Q9UL51	889 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	TLR6	Q9Y2C9	796 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZNF318	Q5VUA4	2279 aa		10.68	□□□□□ -0.7
MRPL55-223	ENST00000459783	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	C2CD4B	A6NLJ0	364 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783		M0QYT0	321 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	MAN2B1	O00754	1011 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	CAPN9	O14815	690 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	ACSL4	O60488	711 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	TSPAN3	O60637	253 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	TULP3	O75386	442 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	ADCY5	O95622	1261 aa		10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	MOCS2	O96007	188 aa	Predicted RBP	10.67	□□□□□ -0.7
MRPL55-223	ENST00000459783	PENK	P01210	267 aa	Predicted RBP	10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms