RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ZC3H7BQ9UGR2 993 aaKnown RBP8.79□□□□□ -1
VPS50-208ENST00000458707 USP18Q9UMW8 372 aa8.79□□□□□ -1
VPS50-208ENST00000458707 SSX2IPQ9Y2D8 614 aa8.79□□□□□ -1
VPS50-208ENST00000458707 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
VPS50-208ENST00000458707 GMEB1Q9Y692 573 aa8.79□□□□□ -1
VPS50-208ENST00000458707 COMMD3-BMI1R4GMX3 469 aa8.79□□□□□ -1
VPS50-208ENST00000458707 TANC1Q9C0D5 1861 aa8.79□□□□□ -1
VPS50-208ENST00000458707 SLC15A5A6NIM6 579 aa8.79□□□□□ -1
VPS50-208ENST00000458707 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
VPS50-208ENST00000458707 H0YIN7 160 aa8.79□□□□□ -1
VPS50-208ENST00000458707 CYB561D2O14569 222 aa8.79□□□□□ -1
VPS50-208ENST00000458707 AP1G1O43747 822 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ADCY3O60266 1144 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ATP6V1G1O75348 118 aa8.79□□□□□ -1
VPS50-208ENST00000458707 USP1O94782 785 aa8.79□□□□□ -1
VPS50-208ENST00000458707 TPPPO94811 219 aa8.79□□□□□ -1
VPS50-208ENST00000458707 GSRP00390 522 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ERBB2P04626 1255 aa8.79□□□□□ -1
VPS50-208ENST00000458707 TNFSF9P41273 254 aa8.79□□□□□ -1
VPS50-208ENST00000458707 SERPINB9P50453 376 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ALDH18A1P54886 795 aaKnown RBP8.79□□□□□ -1
VPS50-208ENST00000458707 STX3Q13277 289 aa8.79□□□□□ -1
VPS50-208ENST00000458707 TFDP2Q14188 446 aa8.79□□□□□ -1
VPS50-208ENST00000458707 TAF5Q15542 800 aa8.79□□□□□ -1
VPS50-208ENST00000458707 DUOXA2Q1HG44 320 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ZNF394Q53GI3 561 aa8.79□□□□□ -1
VPS50-208ENST00000458707 MDH1BQ5I0G3 518 aa8.79□□□□□ -1
VPS50-208ENST00000458707 EFHC1Q5JVL4 640 aa8.79□□□□□ -1
VPS50-208ENST00000458707 NPNTQ6UXI9 565 aa8.79□□□□□ -1
VPS50-208ENST00000458707 RNF111Q6ZNA4 994 aa8.79□□□□□ -1
VPS50-208ENST00000458707 CYS1Q717R9 158 aa8.79□□□□□ -1
VPS50-208ENST00000458707 CTAGE3PQ8IX95 158 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ST13P4Q8IZP2 240 aaPredicted RBP8.79□□□□□ -1
VPS50-208ENST00000458707 EMC1Q8N766 993 aa8.79□□□□□ -1
VPS50-208ENST00000458707 NSUN6Q8TEA1 469 aaKnown RBP8.79□□□□□ -1
VPS50-208ENST00000458707 JADE3Q92613 823 aa8.79□□□□□ -1
VPS50-208ENST00000458707 NLRP4Q96MN2 994 aa8.79□□□□□ -1
VPS50-208ENST00000458707 PEBP4Q96S96 227 aa8.79□□□□□ -1
VPS50-208ENST00000458707 CPXM1Q96SM3 734 aa8.79□□□□□ -1
VPS50-208ENST00000458707 EBF4Q9BQW3 602 aa8.79□□□□□ -1
VPS50-208ENST00000458707 NACA2Q9H009 215 aa8.79□□□□□ -1
VPS50-208ENST00000458707 XYLT2Q9H1B5 865 aa8.79□□□□□ -1
VPS50-208ENST00000458707 EBF3Q9H4W6 596 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ZNF395Q9H8N7 513 aaPredicted RBP8.79□□□□□ -1
VPS50-208ENST00000458707 TMEM165Q9HC07 324 aa8.79□□□□□ -1
VPS50-208ENST00000458707 RNF146Q9NTX7 359 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ITGB1BP2Q9UKP3 347 aa8.79□□□□□ -1
VPS50-208ENST00000458707 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
VPS50-208ENST00000458707 G3BP2Q9UN86 482 aaKnown RBP8.79□□□□□ -1
VPS50-208ENST00000458707 BCLAF3A2AJT9 711 aaKnown RBP8.78□□□□□ -1
VPS50-208ENST00000458707 VWA5AO00534 786 aa8.78□□□□□ -1
VPS50-208ENST00000458707 CASQ2O14958 399 aaPredicted RBP8.78□□□□□ -1
VPS50-208ENST00000458707 MSCO60682 206 aa8.78□□□□□ -1
VPS50-208ENST00000458707 KLHL2O95198 593 aa8.78□□□□□ -1
VPS50-208ENST00000458707 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
VPS50-208ENST00000458707 CSH1P0DML2 217 aa8.78□□□□□ -1
VPS50-208ENST00000458707 CSH2P0DML3 217 aa8.78□□□□□ -1
VPS50-208ENST00000458707 MYL4P12829 197 aa8.78□□□□□ -1
VPS50-208ENST00000458707 UQCRBP14927 111 aa8.78□□□□□ -1
VPS50-208ENST00000458707 OSBPP22059 807 aa8.78□□□□□ -1
VPS50-208ENST00000458707 CNTFP26441 200 aa8.78□□□□□ -1
VPS50-208ENST00000458707 PDE1BQ01064 536 aa8.78□□□□□ -1
VPS50-208ENST00000458707 ASPHQ12797 758 aa8.78□□□□□ -1
VPS50-208ENST00000458707 MSLNQ13421 630 aaPredicted RBP8.78□□□□□ -1
VPS50-208ENST00000458707 LSAMPQ13449 338 aa8.78□□□□□ -1
VPS50-208ENST00000458707 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
VPS50-208ENST00000458707 SEZ6Q53EL9 994 aa8.78□□□□□ -1
VPS50-208ENST00000458707 RASIP1Q5U651 963 aa8.78□□□□□ -1
VPS50-208ENST00000458707 C4orf22Q6V702 233 aa8.78□□□□□ -1
VPS50-208ENST00000458707 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
VPS50-208ENST00000458707 ADGRF2Q8IZF7 708 aa8.78□□□□□ -1
VPS50-208ENST00000458707 GSTCDQ8NEC7 633 aa8.78□□□□□ -1
VPS50-208ENST00000458707 GSDMBQ8TAX9 411 aa8.78□□□□□ -1
VPS50-208ENST00000458707 PIP4K2CQ8TBX8 421 aa8.78□□□□□ -1
VPS50-208ENST00000458707 PIWIL2Q8TC59 973 aaKnown RBP8.78□□□□□ -1
VPS50-208ENST00000458707 LZICQ8WZA0 190 aa8.78□□□□□ -1
VPS50-208ENST00000458707 HSPH1Q92598 858 aa8.78□□□□□ -1
VPS50-208ENST00000458707 ZNF778Q96MU6 729 aa8.78□□□□□ -1
VPS50-208ENST00000458707 RNF157Q96PX1 679 aa8.78□□□□□ -1
VPS50-208ENST00000458707 CALN1Q9BXU9 219 aa8.78□□□□□ -1
VPS50-208ENST00000458707 BCO2Q9BYV7 579 aa8.78□□□□□ -1
VPS50-208ENST00000458707 BRD8Q9H0E9 1235 aa8.78□□□□□ -1
VPS50-208ENST00000458707 XAB2Q9HCS7 855 aaKnown RBP8.78□□□□□ -1
VPS50-208ENST00000458707 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
VPS50-208ENST00000458707 ASNSD1Q9NWL6 643 aa8.78□□□□□ -1
VPS50-208ENST00000458707 PCSK1NQ9UHG2 260 aa8.78□□□□□ -1
VPS50-208ENST00000458707 CPSF3Q9UKF6 684 aaKnown RBP8.78□□□□□ -1
VPS50-208ENST00000458707 RIPK3Q9Y572 518 aa8.78□□□□□ -1
VPS50-208ENST00000458707 COL4A5P29400 1685 aa8.77□□□□□ -1
VPS50-208ENST00000458707 IGKV6D-21A0A0A0MT36 114 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CCDC195A0A1B0GUA6 201 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 OGTO15294 1046 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PEX1O43933 1283 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 UGT1A9O60656 530 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 TOM1L1O75674 476 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 BAG2O95816 211 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PENKP01210 267 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 HOXC6P09630 235 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 KITP10721 976 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ALOX15P16050 662 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms