RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	ZCWPW2	Q504Y3	356 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	COBLL1	Q53SF7	1204 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TMEM240	Q5SV17	173 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	C9orf50	Q5SZB4	431 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ANKRD40	Q6AI12	368 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TTI2	Q6NXR4	508 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LRSAM1	Q6UWE0	723 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LRRC55	Q6ZSA7	311 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SLC24A5	Q71RS6	500 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ECHDC2	Q86YB7	292 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CBWD2	Q8IUF1	395 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CREBRF	Q8IUR6	639 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	FAM186B	Q8IYM0	893 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RPUSD2	Q8IZ73	545 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	GPD1L	Q8N335	351 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CSGALNACT2	Q8N6G5	542 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	MLKL	Q8NB16	471 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TMEM169	Q96HH4	297 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SNX27	Q96L92	541 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ZSWIM3	Q96MP5	696 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	YME1L1	Q96TA2	773 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	NTPCR	Q9BSD7	190 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	FUCA2	Q9BTY2	467 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	NAT10	Q9H0A0	1025 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	MEGF9	Q9H1U4	602 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	MTIF3	Q9H2K0	278 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RPF1	Q9H9Y2	349 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RSAD1	Q9HA92	442 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RGS18	Q9NS28	235 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	C1orf112	Q9NSG2	853 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SNTG2	Q9NY99	539 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CLEC1B	Q9P126	229 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RWDD2A	Q9UIY3	292 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	FRMD4B	Q9Y2L6	1034 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	NFE2L3	Q9Y4A8	694 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SQOR	Q9Y6N5	450 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ATG2A	Q2TAZ0	1938 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PTPRJ	Q12913	1337 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PLXNA4	Q9HCM2	1894 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983		A0A1B0GUA9	196 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CASTOR2	A6NHX0	329 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TBKBP1	A7MCY6	615 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	BECN2	A8MW95	431 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PES1	O00541	588 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PDXK	O00764	312 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CETN3	O15182	167 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SLC16A3	O15427	465 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	EXTL3	O43909	919 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	FAM189A1	O60320	539 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	EFCAB14	O75071	495 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	AKAP3	O75969	853 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	POMC	P01189	267 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	FGB	P02675	491 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TMEM191B	P0C7N4	346 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	STAG3L1	P0CL83	205 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	DLAT	P10515	647 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	ATP2A2	P16615	1042 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	MAK	P20794	623 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CASP4	P49662	377 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SCNN1G	P51170	649 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	RABGGTB	P53611	331 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	ATXN1	P54253	815 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	MLLT6	P55198	1093 aa	Predicted RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TFAM	Q00059	246 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	FKBP3	Q00688	224 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	RNASEL	Q05823	741 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CYP24A1	Q07973	514 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TMEM132D	Q14C87	1099 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SHH	Q15465	462 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	EDRF1	Q3B7T1	1238 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CLLU1OS	Q5K130	101 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SPOUT1	Q5T280	376 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	E4F1	Q66K89	784 aa	Predicted RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	JADE1	Q6IE81	842 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SLFN12L	Q6IEE8	588 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CENPP	Q6IPU0	288 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CEP68	Q76N32	757 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	C16orf59	Q7L2K0	433 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	LUZP1	Q86V48	1076 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	BRSK2	Q8IWQ3	736 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TRIM48	Q8IWZ4	208 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	REXO1L1P	Q8IX06	675 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	XXYLT1	Q8NBI6	393 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PHOSPHO1	Q8TCT1	267 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	URGCP	Q8TCY9	931 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CCDC127	Q96BQ5	260 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	PGBD4	Q96DM1	585 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CNOT6L	Q96LI5	555 aa	Known RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	ACAP3	Q96P50	834 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	GAD1	Q99259	594 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	SYT3	Q9BQG1	590 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	MTMR12	Q9C0I1	747 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CXCL16	Q9H2A7	254 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	CHST12	Q9NRB3	414 aa		5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.03	□□□□□ -1.6
COL21A1-204	ENST00000456983	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms