RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CCDC172P0C7W6 258 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 PNMA6AP0CW24 399 aaPredicted RBP24.15■■□□□ 1.46
CBX3-204ENST00000456948 GBP1P32455 592 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 SOX5P35711 763 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 DGKGP49619 791 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 SEC13P55735 322 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 MPPE1Q53F39 396 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 ADGRF1Q5T601 910 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 OR6B2Q6IFH4 312 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 C12orf40Q86WS4 652 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 C1orf131Q8NDD1 294 aaKnown RBP24.15■■□□□ 1.46
CBX3-204ENST00000456948 USP33Q8TEY7 942 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 AZIN2Q96A70 460 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 GANQ9H2C0 597 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 NLRC4Q9NPP4 1024 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 SLC12A6Q9UHW9 1150 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 CYTH4Q9UIA0 394 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 RAB23Q9ULC3 237 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 TLR6Q9Y2C9 796 aa24.15■■□□□ 1.46
CBX3-204ENST00000456948 CCDC163A0A0D9SF12 145 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 HSF2BPO75031 334 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 CDK17Q00537 523 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 EOGTQ5NDL2 527 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 SDE2Q6IQ49 451 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 CACNA2D4Q7Z3S7 1137 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 DHX40Q8IX18 779 aaKnown RBP24.14■■□□□ 1.45
CBX3-204ENST00000456948 WDTC1Q8N5D0 677 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 TERB1Q8NA31 727 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 BHMTQ93088 406 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 CPXM1Q96SM3 734 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 TMEM51Q9NW97 253 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 NAALADL1Q9UQQ1 740 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 SIK3Q9Y2K2 1263 aa24.14■■□□□ 1.45
CBX3-204ENST00000456948 TYW5A2RUC4 315 aaKnown RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 K7ESF4 209 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 ZBTB24O43167 697 aaPredicted RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 MSI1O43347 362 aaKnown RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 GFPT2O94808 682 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 TDGF1P13385 188 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 MTA1Q13330 715 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 DMC1Q14565 340 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 C10orf76Q5T2E6 689 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 TAF3Q5VWG9 929 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 ERICH1Q86X53 443 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 ZNF557Q8N988 423 aaPredicted RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 DQX1Q8TE96 717 aaKnown RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 TMA16Q96EY4 203 aaKnown RBP24.13■■□□□ 1.45
CBX3-204ENST00000456948 SLC2A11Q9BYW1 496 aa24.13■■□□□ 1.45
CBX3-204ENST00000456948 GOLGA6L19H0YKK7 550 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 IRAK2O43187 625 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 LILRB5O75023 590 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 ALDH1A2O94788 518 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 APBB3O95704 486 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 PENKP01210 267 aaPredicted RBP24.12■■□□□ 1.45
CBX3-204ENST00000456948 APOEP02649 317 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 SLC2A3P11169 496 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 ATP1A3P13637 1013 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 CDH5P33151 784 aaPredicted RBP24.12■■□□□ 1.45
CBX3-204ENST00000456948 TIE1P35590 1138 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 KLK7P49862 253 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 DGKEP52429 567 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 SLC6A3Q01959 620 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 DCAF6Q58WW2 860 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 HEATR6Q6AI08 1181 aaKnown RBP24.12■■□□□ 1.45
CBX3-204ENST00000456948 CCDC117Q8IWD4 279 aaPredicted RBP24.12■■□□□ 1.45
CBX3-204ENST00000456948 FAM217AQ8IXS0 508 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 EZH1Q92800 747 aaPredicted RBP24.12■■□□□ 1.45
CBX3-204ENST00000456948 C18orf8Q96DM3 657 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 HSD3B7Q9H2F3 369 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 PLK2Q9NYY3 685 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 STOML2Q9UJZ1 356 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 MMP17Q9ULZ9 603 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 STARD13Q9Y3M8 1113 aa24.12■■□□□ 1.45
CBX3-204ENST00000456948 FANCMQ8IYD8 2048 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 SERPINC1P01008 464 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 IGLV3-27P01718 113 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 FYNP06241 537 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 FNTBP49356 437 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 PKN3Q6P5Z2 889 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 TRIM72Q6ZMU5 477 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 WDR5BQ86VZ2 330 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 PHTF2Q8N3S3 785 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 TSTD1Q8NFU3 115 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 EPS8L1Q8TE68 723 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 UCMAQ8WVF2 138 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 POLMQ9NP87 494 aaPredicted RBP24.11■■□□□ 1.45
CBX3-204ENST00000456948 RRN3Q9NYV6 651 aa24.11■■□□□ 1.45
CBX3-204ENST00000456948 ACSL4O60488 711 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 KLF8O95600 359 aaPredicted RBP24.1■■□□□ 1.45
CBX3-204ENST00000456948 TRUB2O95900 331 aaKnown RBP24.1■■□□□ 1.45
CBX3-204ENST00000456948 JAM2P57087 298 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 CDR2Q01850 454 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 FYB2Q5VWT5 728 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 FAM183BPQ6ZVS7 135 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 NOP9Q86U38 636 aaKnown RBP24.1■■□□□ 1.45
CBX3-204ENST00000456948 CCDC33Q8N5R6 958 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 ALLCQ8N6M5 410 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 ZNF513Q8N8E2 541 aaPredicted RBP24.1■■□□□ 1.45
CBX3-204ENST00000456948 RNF34Q969K3 372 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 FUCA2Q9BTY2 467 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms