RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 GLUD2P49448 558 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 AIF1P55008 147 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 GRB14Q14449 540 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 CRYMQ14894 314 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 TBCCQ15814 346 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 DGKDQ16760 1214 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 LRRC8BQ6P9F7 803 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 KYAT3Q6YP21 454 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 CDHR3Q6ZTQ4 885 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 MOB2Q70IA6 237 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 TAB3Q8N5C8 712 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 KCTD13Q8WZ19 329 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 THOC1Q96FV9 657 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 SPATA13Q96N96 652 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 IQCGQ9H095 443 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 STN1Q9H668 368 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 SNTG2Q9NY99 539 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 DTLQ9NZJ0 730 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 FZD10Q9ULW2 581 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 RAD54BQ9Y620 910 aa12.94□□□□□ -0.34
ECHDC1-209ENST00000454591 HMX2A2RU54 273 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 OPHN1O60890 802 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 BPGMP07738 259 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CSH1P0DML2 217 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CSH2P0DML3 217 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 DARSP14868 501 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 EPHB2P29323 1055 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ADAM17P78536 824 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 GBE1Q04446 702 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 PAFAH1B3Q15102 231 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SLC25A52Q3SY17 297 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 FBXO47Q5MNV8 452 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 C4orf50Q6ZRC1 276 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SLC9A7Q96T83 725 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 HNRNPABQ99729 332 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 MIPEPQ99797 713 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CADM1Q9BY67 442 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 C12orf65Q9H3J6 166 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ABHD16BQ9H3Z7 469 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 DHX35Q9H5Z1 703 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 DCLRE1BQ9H816 532 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SORCS3Q9UPU3 1222 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 NRCAMQ92823 1304 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CAPN14A8MX76 684 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 A8MXQ7 604 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 I3L4J1 428 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 PIK3R2O00459 728 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 PIAS1O75925 651 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SMPD1P17405 629 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 GM2AP17900 193 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 TFE3P19532 575 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 LRPAP1P30533 357 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ARL4AP40617 200 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 OVGP1Q12889 678 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 INSCQ1MX18 579 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SV2CQ496J9 727 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 HEATR6Q6AI08 1181 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CATSPER4Q7RTX7 472 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 CTAGE3PQ8IX95 158 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 OR6B3Q8NGW1 331 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 TFB1MQ8WVM0 346 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 HTR3CQ8WXA8 447 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 N4BP2L2Q92802 583 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ISL2Q96A47 359 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 E2F7Q96AV8 911 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 TNIP3Q96KP6 325 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 ZNF570Q96NI8 536 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 SLC2A13Q96QE2 648 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 NPY6RQ99463 290 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 IGSF9Q9P2J2 1179 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 DCTN4Q9UJW0 460 aa12.93□□□□□ -0.34
ECHDC1-209ENST00000454591 A0A0G2JND7 137 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 KPNA7A9QM74 516 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 C9IYK1 514 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 H3BRJ5 948 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 GSC2O15499 205 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 DIAPH2O60879 1101 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 RECQL4O94761 1208 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 LUC7L3O95232 432 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms