RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 STXBP5Q5T5C0 1151 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 OR6B2Q6IFH4 312 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 CC2D1AQ6P1N0 951 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 C1orf228Q6PIY5 440 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 OLFML1Q6UWY5 402 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 BHLHA9Q7RTU4 235 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 MFSD6LQ8IWD5 586 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ARL14EPQ8N8R7 260 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 C3orf20Q8ND61 904 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 SLC30A5Q8TAD4 765 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 BPIFB1Q8TDL5 484 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 CPA5Q8WXQ8 436 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 DNASE1L2Q92874 299 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 USP13Q92995 863 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 FAM149B1Q96BN6 582 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ZNF775Q96BV0 537 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 PLD4Q96BZ4 506 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 OTUB2Q96DC9 234 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 MSANTD3Q96H12 275 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 CCDC42Q96M95 316 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ZSWIM3Q96MP5 696 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 SERPINB11Q96P15 392 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 SLC2A13Q96QE2 648 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 PCDHB18PQ96TA0 734 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 SMOC2Q9H3U7 446 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 KCNK12Q9HB15 430 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 LUC7LQ9NQ29 371 aaKnown RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 TRPV5Q9NQA5 729 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 TBC1D14Q9P2M4 693 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 LSM7Q9UK45 103 aaKnown RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 STAP1Q9ULZ2 295 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ZNF510Q9Y2H8 683 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 PAXBP1Q9Y5B6 917 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 NUMBLQ9Y6R0 609 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 MYO10Q9HD67 2058 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 HEPACAM2A8MVW5 462 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 DDX3XO00571 662 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 CHADO15335 359 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 AKR1B10O60218 316 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 DAB1O75553 588 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 PRAMEF12O95522 483 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 LATS1O95835 1130 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 F9P00740 461 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SRFP11831 508 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ALADP13716 330 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SNRPBP14678 240 aaKnown RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 GBP1P32455 592 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 NOS2P35228 1153 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MLLT6P55198 1093 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ADKP55263 362 aaKnown RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 RING1Q06587 406 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 PDGFRLQ15198 375 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ZNF77Q15935 545 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SLC18A3Q16572 532 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 C10orf76Q5T2E6 689 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ACBD5Q5T8D3 534 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 FAM102AQ5T9C2 384 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 PARM1Q6UWI2 310 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MMS22LQ6ZRQ5 1243 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 FAM183BPQ6ZVS7 135 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 Q6ZVU0 165 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MON1BQ7L1V2 547 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 RNF135Q8IUD6 432 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 TMTC1Q8IUR5 882 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 CCDC170Q8IYT3 715 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MCOLN2Q8IZK6 566 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 FGF14Q92915 247 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 IRF7Q92985 503 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 EXOC4Q96A65 974 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 NCAPGQ9BPX3 1015 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 C11orf70Q9BRQ4 267 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 TRMT61BQ9BVS5 477 aaKnown RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ISCUQ9H1K1 167 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MRPL47Q9HD33 250 aaKnown RBP9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SLC2A4RGQ9NR83 387 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 OSER1Q9NX31 292 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 MARCH2Q9P0N8 246 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ARHGAP20Q9P2F6 1191 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 ADAMTS1Q9UHI8 967 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 DUSP12Q9UNI6 340 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SH3BP1Q9Y3L3 701 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 CPQQ9Y646 472 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 SCINQ9Y6U3 715 aa9.09□□□□□ -0.95
COL28A1-205ENST00000453441 KIF26AQ9ULI4 1882 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 LEFTY2O00292 366 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 PIK3R2O00459 728 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 ZNF263O14978 683 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 NRDCO43847 1150 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 IPO7O95373 1038 aaKnown RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SLC2A3P11169 496 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SKILP12757 684 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms