RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 NDUFA8P51970 172 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 GRIK2Q13002 908 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 RSRC2Q7L4I2 434 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 ANKS1BQ7Z6G8 1248 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 DENND1CQ8IV53 801 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 CHCHD4Q8N4Q1 142 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 ZCCHC9Q8N567 271 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 FOXJ1Q92949 421 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF419Q96HQ0 510 aaPredicted RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 HEXIM2Q96MH2 286 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 CDK5RAP1Q96SZ6 601 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 GPR174Q9BXC1 333 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 MKRN2Q9H000 416 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 MIR1-1HGQ9H1L0 117 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 PRDM16Q9HAZ2 1276 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 TMEM8AQ9HCN3 771 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 DNAAF2Q9NVR5 837 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 CLIC5Q9NZA1 410 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 MARCH2Q9P0N8 246 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 SUSD2Q9UGT4 822 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 AGO1Q9UL18 857 aaKnown RBP12.25□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF510Q9Y2H8 683 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 SLC27A6Q9Y2P4 619 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 USP3Q9Y6I4 520 aa12.25□□□□□ -0.45
GARNL3-210ENST00000453030 SLC12A8A0AV02 714 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SH3BP5O60239 455 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SYNCRIPO60506 623 aaKnown RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 PLXNA2O75051 1894 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 APC2O95996 2303 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 CYBBP04839 570 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 NCAM1P13591 858 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 GNSP15586 552 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 PRKCHP24723 683 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 RPL13P26373 211 aaKnown RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 CHKAP35790 457 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 KRT85P78386 507 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 COG7P83436 770 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 DPYDQ12882 1025 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF234Q14588 700 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 NFIL3Q16649 462 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 WDR45BQ5MNZ6 344 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 KRT39Q6A163 491 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 PIGZQ86VD9 579 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SMYD4Q8IYR2 804 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SLC4A11Q8NBS3 891 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 UCMAQ8WVF2 138 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SORCS1Q8WY21 1168 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 SEMA4DQ92854 862 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 FAM124BQ9H5Z6 455 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 USP36Q9P275 1121 aaKnown RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 THAP10Q9P2Z0 257 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-210ENST00000453030 FBXO10Q9UK96 956 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 STRIP2Q9ULQ0 834 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 CLEC4EQ9ULY5 219 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 MSRB2Q9Y3D2 182 aa12.24□□□□□ -0.45
GARNL3-210ENST00000453030 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 GJB3O75712 270 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 RDXP35241 583 aaKnown RBP12.23□□□□□ -0.45
GARNL3-210ENST00000453030 TPMTP51580 245 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 RAD23BP54727 409 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 YWHAGP61981 247 aaKnown RBP eCLIP12.23□□□□□ -0.45
GARNL3-210ENST00000453030 ADAM9Q13443 819 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 GOLGA7BQ2TAP0 167 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 FAM124AQ86V42 546 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 TMPRSS6Q8IU80 811 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 ARHGAP18Q8N392 663 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 GUF1Q8N442 669 aaKnown RBP12.23□□□□□ -0.45
GARNL3-210ENST00000453030 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 NDRG1Q92597 394 aaKnown RBP12.23□□□□□ -0.45
GARNL3-210ENST00000453030 SIPA1Q96FS4 1042 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 TMEM176AQ96HP8 235 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 ULBP1Q9BZM6 244 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-210ENST00000453030 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 ADAMTS20P59510 1910 aa12.23□□□□□ -0.45
GARNL3-210ENST00000453030 A0A1B0GTW7 788 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 H0Y626 953 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TULP2O00295 520 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 NPC1O15118 1278 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TSPAN3O60637 253 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TRIM16O95361 564 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 EPHX1P07099 455 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 FTH1P19P0C7X4 201 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 EPB41P11171 864 aaKnown RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 HLA-EP13747 358 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TKTL1P51854 596 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 COPAP53621 1224 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 SLC8A3P57103 927 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ARID5AQ03989 594 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ENPEPQ07075 957 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ENPP2Q13822 863 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 EIF4HQ15056 248 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms