RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 C1orf220Q5T0J3 134 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 IL27RAQ6UWB1 636 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 TMPRSS6Q8IU80 811 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
HERC3-207ENST00000452979 TWNKQ96RR1 684 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 GPR174Q9BXC1 333 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 DCLK3Q9C098 648 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 CCDC86Q9H6F5 360 aaKnown RBP12.26□□□□□ -0.45
HERC3-207ENST00000452979 PLK2Q9NYY3 685 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 NUDT5Q9UKK9 219 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 PCDHGB2Q9Y5G2 931 aa12.26□□□□□ -0.45
HERC3-207ENST00000452979 MEI4A8MW99 385 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 PDXKO00764 312 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 BCAT2O15382 392 aaPredicted RBP12.25□□□□□ -0.45
HERC3-207ENST00000452979 TIMM44O43615 452 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 CLSTN1O94985 981 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 ADORA2BP29275 332 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 ME1P48163 572 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 COPAP53621 1224 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 EIF4HQ15056 248 aaKnown RBP12.25□□□□□ -0.45
HERC3-207ENST00000452979 DCAF12L1Q5VU92 463 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 SPOPLQ6IQ16 392 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 TMPRSS7Q7RTY8 843 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 ZCCHC9Q8N567 271 aaKnown RBP12.25□□□□□ -0.45
HERC3-207ENST00000452979 KIAA0895Q8NCT3 520 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 UCMAQ8WVF2 138 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 BHMTQ93088 406 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 SIPA1Q96FS4 1042 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 CDK5RAP1Q96SZ6 601 aaKnown RBP12.25□□□□□ -0.45
HERC3-207ENST00000452979 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 DUSP16Q9BY84 665 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 SLC2A11Q9BYW1 496 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 UBXN6Q9BZV1 441 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 PCED1AQ9H1Q7 454 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 GAREM1Q9H706 876 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 CYP3A43Q9HB55 503 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 IL21RQ9HBE5 538 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 TM7SF3Q9NS93 570 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 ELOVL2Q9NXB9 296 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 DKK4Q9UBT3 224 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
HERC3-207ENST00000452979 ANKRD11Q6UB99 2663 aaPredicted RBP12.25□□□□□ -0.45
HERC3-207ENST00000452979 MAPK13O15264 365 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 GADD45BO75293 160 aaPredicted RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 CER1O95813 267 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 HLA-DRAP01903 254 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 NR3C1P04150 777 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 RALAP11233 206 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 MATKP42679 507 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 AFMP43652 599 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 MCCD1P59942 119 aaPredicted RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 HLA-BQ31612 363 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 SOWAHCQ53LP3 525 aaPredicted RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 RESP18Q5W5W9 173 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 C19orf48Q6RUI8 117 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 PDZD3Q86UT5 571 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 FAM217AQ8IXS0 508 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 CPXM2Q8N436 756 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 SETD7Q8WTS6 366 aaKnown RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 PRCCQ92733 491 aaPredicted RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 CDC6Q99741 560 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 MIR1-1HGQ9H1L0 117 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 OSGEPQ9NPF4 335 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
HERC3-207ENST00000452979 AGO1Q9UL18 857 aaKnown RBP12.24□□□□□ -0.45
HERC3-207ENST00000452979 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
HERC3-207ENST00000452979 CILPO75339 1184 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 SLFN14P0C7P3 912 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 ENPEPQ07075 957 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 ZNF234Q14588 700 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 COL28A1Q2UY09 1125 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 JAKMIP2Q96AA8 810 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 DNAI2Q9GZS0 605 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 GOLPH3LQ9H4A5 285 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 APOBEC3GQ9HC16 384 aaKnown RBP12.23□□□□□ -0.45
HERC3-207ENST00000452979 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 EIF2B4Q9UI10 523 aaKnown RBP12.23□□□□□ -0.45
HERC3-207ENST00000452979 CLEC4EQ9ULY5 219 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 TRAF3IP3Q9Y228 551 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 FNDC3AQ9Y2H6 1198 aaKnown RBP12.23□□□□□ -0.45
HERC3-207ENST00000452979 TMEM131Q92545 1883 aa12.23□□□□□ -0.45
HERC3-207ENST00000452979 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
HERC3-207ENST00000452979 A0A1W2PQ27 194 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 A0A1W2PQ64 194 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 FLRT2O43155 660 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 CYBBP04839 570 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 PRKCHP24723 683 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 CORO1AP31146 461 aaKnown RBP12.22□□□□□ -0.45
HERC3-207ENST00000452979 PIK3CAP42336 1068 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 VAMP7P51809 220 aa12.22□□□□□ -0.45
HERC3-207ENST00000452979 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
HERC3-207ENST00000452979 EFEMP1Q12805 493 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms