RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ACACBO00763 2458 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 STPG1Q5TH74 334 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 TCEAL6Q6IPX3 200 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 PMF1Q6P1K2 205 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 ARHGEF19Q8IW93 802 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 SCML4Q8N228 414 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 CPXM2Q8N436 756 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 DDI1Q8WTU0 396 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 UCMAQ8WVF2 138 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 GOLGA1Q92805 767 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 TCEAL3Q969E4 200 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 ACOX2Q99424 681 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 HCN2Q9UL51 889 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 SLC27A6Q9Y2P4 619 aa13.47□□□□□ -0.25
CHD3-206ENST00000452447 HBS1LQ9Y450 684 aaKnown RBP13.47□□□□□ -0.25
CHD3-206ENST00000452447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 A0A1W2PQF6 199 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 GFRA2O00451 464 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 PIK3R2O00459 728 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 KHNYNO15037 678 aaKnown RBP13.46□□□□□ -0.25
CHD3-206ENST00000452447 KRT5P13647 590 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 GABRG2P18507 467 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 KCNA4P22459 653 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 MFAP3P55082 362 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 DAOAP59103 153 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 E2F5Q15329 346 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.25
CHD3-206ENST00000452447 MAP7D1Q3KQU3 841 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 PPM1JQ5JR12 505 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 FRMD1Q8N878 549 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
CHD3-206ENST00000452447 IRGQQ8WZA9 623 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 PIGKQ92643 395 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 HSFY1Q96LI6 401 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 GABRG3Q99928 467 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.25
CHD3-206ENST00000452447 CACNA2D2Q9NY47 1150 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.25
CHD3-206ENST00000452447 ASCC3Q8N3C0 2202 aaKnown RBP13.46□□□□□ -0.26
CHD3-206ENST00000452447 NPC1O15118 1278 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ZNF217O75362 1048 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ZNF445P59923 1031 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 STARD3Q14849 445 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 GEN1Q17RS7 908 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 MPPE1Q53F39 396 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 SPDYCQ5MJ68 293 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ARMCX6Q7L4S7 300 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ANKS1BQ7Z6G8 1248 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 P2RY11Q96G91 374 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 EDEM2Q9BV94 578 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
CHD3-206ENST00000452447 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 AP5Z1O43299 807 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
CHD3-206ENST00000452447 FBXO21O94952 628 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 CALCAP01258 141 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 LTFP02788 710 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 PTGER3P43115 390 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ZNF132P52740 706 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 RPL6Q02878 288 aaKnown RBP13.45□□□□□ -0.26
CHD3-206ENST00000452447 ARID5AQ03989 594 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 TPD52L1Q16890 204 aaPredicted RBP13.45□□□□□ -0.26
CHD3-206ENST00000452447 KIAA1211LQ6NV74 962 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 SLC36A4Q6YBV0 504 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ENOSF1Q7L5Y1 443 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 FAM217AQ8IXS0 508 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 FAM81BQ96LP2 452 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 SLC2A11Q9BYW1 496 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 CIPCQ9C0C6 399 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 MIS12Q9H081 205 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 ST7Q9NRC1 585 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
CHD3-206ENST00000452447 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 STON1Q9Y6Q2 735 aa13.45□□□□□ -0.26
CHD3-206ENST00000452447 LNP1A1A4G5 178 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 MED7O43513 233 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 TSPAN3O60637 253 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
CHD3-206ENST00000452447 LATS1O95835 1130 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 NDUFV2P19404 249 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 DPP6P42658 865 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 EIF4HQ15056 248 aaKnown RBP13.44□□□□□ -0.26
CHD3-206ENST00000452447 ADGRF1Q5T601 910 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 LYSMD4Q5XG99 296 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 UNC45BQ8IWX7 931 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 TMA16Q96EY4 203 aaKnown RBP13.44□□□□□ -0.26
CHD3-206ENST00000452447 PIWIL1Q96J94 861 aaKnown RBP13.44□□□□□ -0.26
CHD3-206ENST00000452447 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 ELOVL2Q9NXB9 296 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 STOML2Q9UJZ1 356 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 CLEC4EQ9ULY5 219 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms