RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ADH1CP00326 375 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 PON2Q15165 354 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 TAF5Q15542 800 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 LY6G5CQ5SRR4 150 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 SYPL2Q5VXT5 272 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 NAA35Q5VZE5 725 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 OLFML1Q6UWY5 402 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 TOGARAM2Q6ZUX3 1019 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 MSANTD4Q8NCY6 345 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 EXOC4Q96A65 974 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 RMDN1Q96DB5 314 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 IQCDQ96DY2 449 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 PCDHB18PQ96TA0 734 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 AGPAT1Q99943 283 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 EPC1Q9H2F5 836 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 SPHK2Q9NRA0 654 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 RBM12Q9NTZ6 932 aaKnown RBP20.8■□□□□ 0.92
COL9A3-202ENST00000452372 C2orf42Q9NWW7 574 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 AIPL1Q9NZN9 384 aa20.8■□□□□ 0.92
COL9A3-202ENST00000452372 A0A1W2PQJ5 194 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 CBFA2T2O43439 604 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 HSF2BPO75031 334 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 UNGP13051 313 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-202ENST00000452372 CORO1AP31146 461 aaKnown RBP20.79■□□□□ 0.92
COL9A3-202ENST00000452372 GALK1P51570 392 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 SATB1Q01826 763 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 GAB4Q2WGN9 574 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 TMEM196Q5HYL7 178 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 SLC26A9Q7LBE3 791 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 TMEM25Q86YD3 366 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 ZNF397Q8NF99 534 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-202ENST00000452372 DQX1Q8TE96 717 aaKnown RBP20.79■□□□□ 0.92
COL9A3-202ENST00000452372 SLC2A13Q96QE2 648 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 P2RY13Q9BPV8 354 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 IER2Q9BTL4 223 aa20.79■□□□□ 0.92
COL9A3-202ENST00000452372 FAM126AQ9BYI3 521 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-202ENST00000452372 MSI1O43347 362 aaKnown RBP20.78■□□□□ 0.92
COL9A3-202ENST00000452372 ADH5P11766 374 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 HOXC13P31276 330 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 CHKAP35790 457 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 SCNN1AP37088 669 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 HARS2P49590 506 aaKnown RBP20.78■□□□□ 0.92
COL9A3-202ENST00000452372 GAD2Q05329 585 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 RING1Q06587 406 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 NNTQ13423 1086 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 DGKKQ5KSL6 1271 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 SFMBT2Q5VUG0 894 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 XYLT1Q86Y38 959 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 DENND1CQ8IV53 801 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 DEFB106AQ8N104 65 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 SERPINB11Q96P15 392 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 FBRSL1Q9HCM7 1045 aaKnown RBP20.78■□□□□ 0.92
COL9A3-202ENST00000452372 AGO1Q9UL18 857 aaKnown RBP20.78■□□□□ 0.92
COL9A3-202ENST00000452372 SDK1Q7Z5N4 2213 aa20.78■□□□□ 0.92
COL9A3-202ENST00000452372 HOXC11O43248 304 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-202ENST00000452372 IGLV3-27P01718 113 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 TGM1P22735 817 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 MMP8P22894 467 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 OPRD1P41143 372 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 CXCL12P48061 93 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 TBX4P57082 545 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 FOXK2Q01167 660 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 DMWDQ09019 674 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 GRSF1Q12849 480 aaKnown RBP eCLIP20.77■□□□□ 0.92
COL9A3-202ENST00000452372 CCINQ13939 588 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 LRRC32Q14392 662 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 ASIC2Q16515 512 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 CLEC16AQ2KHT3 1053 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 DCAF6Q58WW2 860 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 NAIF1Q69YI7 327 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-202ENST00000452372 Q6ZS52 159 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 UNC45BQ8IWX7 931 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 SPEM1Q8N4L4 309 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 SLC30A5Q8TAD4 765 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 CD101Q93033 1021 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 SYT11Q9BT88 431 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 NUCKS1Q9H1E3 243 aaKnown RBP20.77■□□□□ 0.92
COL9A3-202ENST00000452372 MARK1Q9P0L2 795 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 WDR35Q9P2L0 1181 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 CAPN11Q9UMQ6 739 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 TLR6Q9Y2C9 796 aa20.77■□□□□ 0.92
COL9A3-202ENST00000452372 ITIH6Q6UXX5 1313 aa20.77■□□□□ 0.91
COL9A3-202ENST00000452372 SPTBN2O15020 2390 aa20.77■□□□□ 0.91
COL9A3-202ENST00000452372 K7ESF4 209 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 GRAP2O75791 330 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 LATS1O95835 1130 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 TRUB2O95900 331 aaKnown RBP20.76■□□□□ 0.91
COL9A3-202ENST00000452372 DRD1P21728 446 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 EIF2DP41214 584 aaKnown RBP20.76■□□□□ 0.91
COL9A3-202ENST00000452372 PRKCIP41743 596 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 CCR3P51677 355 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 CENPCQ03188 943 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 ANO4Q32M45 955 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 C2CD6Q53TS8 623 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 E4F1Q66K89 784 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-202ENST00000452372 NUGGCQ68CJ6 796 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 FSTL4Q6MZW2 842 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 TAC4Q86UU9 113 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 FAM217AQ8IXS0 508 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 SYNPOQ8N3V7 929 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms