RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 TMEM8AQ9HCN3 771 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 MSRB2Q9Y3D2 182 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 MUC22E2RYF6 1773 aaPredicted RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 MDM4O15151 490 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 CD6P30203 668 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 PSMC2P35998 433 aaKnown RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 SYKP43405 635 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 MCCD1P59942 119 aaPredicted RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 PPP3CAQ08209 521 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 ZNF423Q2M1K9 1284 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 PPP1R26Q5T8A7 1209 aaPredicted RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 FYB2Q5VWT5 728 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 KRT39Q6A163 491 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 KIAA1324Q6UXG2 1013 aaKnown RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 ANKS1BQ7Z6G8 1248 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 SCD5Q86SK9 330 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 CPXM2Q8N436 756 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 DEFB119Q8N690 84 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 UCMAQ8WVF2 138 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 ZCCHC14Q8WYQ9 949 aaKnown RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 BHMTQ93088 406 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 UBXN6Q9BZV1 441 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 ZDHHC5Q9C0B5 715 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 FSCN3Q9NQT6 498 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 USP36Q9P275 1121 aaKnown RBP11.43□□□□□ -0.58
USP1-204ENST00000452143 RASAL2Q9UJF2 1139 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 NUDT5Q9UKK9 219 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 RAD54BQ9Y620 910 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 STON1Q9Y6Q2 735 aa11.43□□□□□ -0.58
USP1-204ENST00000452143 SPAARA0A1B0GVQ0 90 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 FAM221BA6H8Z2 402 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 STX10O60499 249 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 GJB3O75712 270 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 KLKB1P03952 638 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CYBBP04839 570 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CD59P13987 128 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CORO1AP31146 461 aaKnown RBP11.42□□□□□ -0.58
USP1-204ENST00000452143 MXI1P50539 228 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 SLC8A3P57103 927 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 ZNF445P59923 1031 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 KRT85P78386 507 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 DPYDQ12882 1025 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 GEN1Q17RS7 908 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 PLEKHG6Q3KR16 790 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 FUT11Q495W5 492 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 ZCWPW2Q504Y3 356 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 RAB41Q5JT25 222 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 ARHGAP17Q68EM7 881 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 FAM217AQ8IXS0 508 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 RGL4Q8IZJ4 473 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CADM4Q8NFZ8 388 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 DNASE2BQ8WZ79 361 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 PLD4Q96BZ4 506 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 SLC2A11Q9BYW1 496 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 PRDM16Q9HAZ2 1276 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CD93Q9NPY3 652 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 CISHQ9NSE2 258 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 PLK2Q9NYY3 685 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 THAP10Q9P2Z0 257 aaPredicted RBP11.42□□□□□ -0.58
USP1-204ENST00000452143 STRIP2Q9ULQ0 834 aa11.42□□□□□ -0.58
USP1-204ENST00000452143 ACACAQ13085 2346 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 A0A1B0GTW7 788 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 MEI4A8MW99 385 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 WASH3PC4AMC7 463 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 SYNCRIPO60506 623 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 IGLV3-19P01714 112 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 OXTRP30559 389 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 IL12RB1P42701 662 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 ADAM9Q13443 819 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 PIGZQ86VD9 579 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 SLC4A11Q8NBS3 891 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 P2RY11Q96G91 374 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 TOE1Q96GM8 510 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 CCDC34Q96HJ3 373 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 PIWIL1Q96J94 861 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 MKRN2Q9H000 416 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 SLC6A17Q9H1V8 727 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 MMRN2Q9H8L6 949 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 ITM2CQ9NQX7 267 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 OLA1Q9NTK5 396 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 WSB2Q9NYS7 404 aaPredicted RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 KLK13Q9UKR3 277 aa11.41□□□□□ -0.58
USP1-204ENST00000452143 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
USP1-204ENST00000452143 FASNP49327 2511 aaKnown RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 SRRM3A6NNA2 597 aaPredicted RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 ZBED1O96006 694 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 NCAM1P13591 858 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms