RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ARHGEF4Q9NR80 690 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 ST7Q9NRC1 585 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 FAM207AQ9NSI2 230 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 ASNSD1Q9NWL6 643 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 DEC1Q9P2X7 70 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 CLEC4EQ9ULY5 219 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 CFAP54Q96N23 3096 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 CCDC163A0A0D9SF12 145 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 HRO43593 1189 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 KRT9P35527 623 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 CHKAP35790 457 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 ZNF165P49910 485 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 NRLP54845 237 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 PITX1P78337 314 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 ANO4Q32M45 955 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 FAM133BQ5BKY9 247 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 FKBP15Q5T1M5 1219 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 TOGARAM2Q6ZUX3 1019 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 PASD1Q8IV76 773 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 TERB1Q8NA31 727 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 IL17RCQ8NAC3 791 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 C1orf131Q8NDD1 294 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 NKD2Q969F2 451 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 EPC1Q9H2F5 836 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 CD248Q9HCU0 757 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC27A6Q9Y2P4 619 aa16.8■□□□□ 0.28
SCAMP4-205ENST00000452128 SMTNL1A8MU46 457 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 NEDD8-MDP1E9PL57 170 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 ADAM23O75077 832 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 APODP05090 189 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 NCAM1P13591 858 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 SOX5P35711 763 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 FNTBP49356 437 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 UBXN1Q04323 297 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 ADGRF1Q5T601 910 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 NADSYN1Q6IA69 706 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 TAC4Q86UU9 113 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 WDR5BQ86VZ2 330 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 OLIG1Q8TAK6 271 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 POPDC2Q9HBU9 364 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 TLR6Q9Y2C9 796 aa16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-205ENST00000452128 A0A1B0GTH6 734 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 SYCE3A1L190 88 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 GFRA3O60609 400 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 LSM8O95777 96 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 CYP1A1P04798 512 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 MMEP08473 750 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 NOMO3P69849 1222 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 FMO1Q01740 532 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 DMC1Q14565 340 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 HSF5Q4G112 596 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 C2orf27AQ580R0 203 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 ZC3H14Q6PJT7 736 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 TMEM92Q6UXU6 159 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 FAM183BPQ6ZVS7 135 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC26A9Q7LBE3 791 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 KIAA0907Q7Z7F0 614 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 LONP2Q86WA8 852 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 CAMKK1Q8N5S9 505 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 CCDC26Q8TAB7 109 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC20A1Q8WUM9 679 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 ATRIPQ8WXE1 791 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 MYEOVQ96EZ4 313 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 IRX2Q9BZI1 471 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 NLRC4Q9NPP4 1024 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 DNAJC17Q9NVM6 304 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 EBF1Q9UH73 591 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 MMP17Q9ULZ9 603 aa16.78■□□□□ 0.28
SCAMP4-205ENST00000452128 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 KCNU1A8MYU2 1149 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SGK1O00141 431 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 IRAK2O43187 625 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 GFPT2O94808 682 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 LMNAP02545 664 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 TPM2P07951 284 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 HOXD9P28356 352 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC6A4P31645 630 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SCNN1AP37088 669 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 TBX4P57082 545 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 CDR2Q01850 454 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC6A3Q01959 620 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 KDSRQ06136 332 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 PPP2R5DQ14738 602 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 NR1I3Q14994 352 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 EFHC1Q5JVL4 640 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms