RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC34A2O95436 690 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 IGLV3-27P01718 113 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 KLKB1P03952 638 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 PDGFRAP16234 1089 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 PSMC3P17980 439 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 GPD1P21695 349 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 TBX4P57082 545 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 GPC5P78333 572 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 OGDHQ02218 1023 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 NNTQ13423 1086 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 IFI16Q16666 785 aaKnown RBP13.57□□□□□ -0.24
VPS33A-202ENST00000451053 C15orf59Q2T9L4 293 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-202ENST00000451053 SLC25A52Q3SY17 297 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 CCDC14Q49A88 953 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 RNF135Q8IUD6 432 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 NT5C3BQ969T7 300 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 PLD4Q96BZ4 506 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 FCRL2Q96LA5 508 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-202ENST00000451053 NUP85Q9BW27 656 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 TRIM7Q9C029 511 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 DDIT4Q9NX09 232 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 STAP1Q9ULZ2 295 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 WNT6Q9Y6F9 365 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 SCINQ9Y6U3 715 aa13.57□□□□□ -0.24
VPS33A-202ENST00000451053 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 E2F8A0AVK6 867 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TMEM191CA6NGB0 347 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 NARSO43776 548 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 ZNF500O60304 480 aaPredicted RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TUBB4AP04350 444 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 SDC4P31431 198 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 PTPN9P43378 593 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 ATP11AP98196 1134 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 ZNF252P-AS1Q0IIN9 211 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 NME3Q13232 169 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 EIF4EBP2Q13542 120 aaPredicted RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TDGQ13569 410 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 CDO1Q16878 200 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 SH3PXD2AQ5TCZ1 1133 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 Q6ZNB5 142 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 HTR3DQ70Z44 454 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 BNIPLQ7Z465 357 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 REXO1L1PQ8IX06 675 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 YAF2Q8IY57 180 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 SLC39A13Q96H72 371 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 UHRF1Q96T88 793 aaPredicted RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 LINC00597Q9H2U6 94 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 MRPL47Q9HD33 250 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 LZTFL1Q9NQ48 299 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 PIGVQ9NUD9 493 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 LSM7Q9UK45 103 aaKnown RBP13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TFR2Q9UP52 801 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 TLR6Q9Y2C9 796 aa13.56□□□□□ -0.24
VPS33A-202ENST00000451053 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 KIF5CO60282 957 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 GDI1P31150 447 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 GBP1P32455 592 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 ZNF143P52747 638 aaPredicted RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 RING1Q06587 406 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 ZC3H12AQ5D1E8 599 aaKnown RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 CC2D1AQ6P1N0 951 aaPredicted RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 DENND1CQ8IV53 801 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 BBS7Q8IWZ6 715 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 PGAP3Q96FM1 320 aaPredicted RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 THG1LQ9NWX6 298 aaKnown RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 DUS2Q9NX74 493 aaKnown RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 CTTNBP2NLQ9P2B4 639 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 AGO1Q9UL18 857 aaKnown RBP13.55□□□□□ -0.24
VPS33A-202ENST00000451053 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
VPS33A-202ENST00000451053 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 USP27XA6NNY8 438 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 ARNTLO00327 626 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 CHADO15335 359 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 ENDOD1O94919 500 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
VPS33A-202ENST00000451053 ARSAP15289 507 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 PSMA2P25787 234 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
VPS33A-202ENST00000451053 IFNAR2P48551 515 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms