RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 APOEP02649 317 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 KLKB1P03952 638 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 SERPING1P05155 500 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 DCNP07585 359 aaKnown RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 SKILP12757 684 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 TARSP26639 723 aaKnown RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 AVPR2P30518 371 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 NOS2P35228 1153 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 MATKP42679 507 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 SLC11A2P49281 568 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 VCPP55072 806 aaKnown RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 RING1Q06587 406 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 NNTQ13423 1086 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 LRRC32Q14392 662 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 LY6G5CQ5SRR4 150 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 E4F1Q66K89 784 aaPredicted RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 ACAD10Q6JQN1 1059 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 RHBDF2Q6PJF5 856 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 TXNDC11Q6PKC3 985 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 TPGS1Q6ZTW0 290 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 ZNF571Q7Z3V5 609 aaPredicted RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 GAS2L3Q86XJ1 694 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 PHF13Q86YI8 300 aaPredicted RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 CD101Q93033 1021 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 P2RY13Q9BPV8 354 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 SELENOOQ9BVL4 669 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 ZNHIT6Q9NWK9 470 aaKnown RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 COX16Q9P0S2 106 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 SLC12A6Q9UHW9 1150 aa14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
GTF3C3-206ENST00000448539 TMCO5BA8MYB1 307 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 PI15O43692 258 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 LATS1O95835 1130 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 SLC2A3P11169 496 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 MAGEA9P43362 315 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 MRE11P49959 708 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 GALK1P51570 392 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 TMC6Q7Z403 805 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 PHLDB2Q86SQ0 1253 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 TMEM25Q86YD3 366 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 TMEM105Q8N8V8 129 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 XPO6Q96QU8 1125 aaKnown RBP14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 DDX50Q9BQ39 737 aaKnown RBP14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 BBS2Q9BXC9 721 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 LMAN1LQ9HAT1 526 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 METTL5Q9NRN9 209 aaKnown RBP14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 DDIT4Q9NX09 232 aa14.59□□□□□ -0.07
GTF3C3-206ENST00000448539 SHISA7A6NL88 538 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 M0QYT0 321 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 IRAK2O43187 625 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 HOXC11O43248 304 aaPredicted RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 MOCS2O96007 188 aaPredicted RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 F9P00740 461 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 IGLV3-27P01718 113 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 ABCB4P21439 1286 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 DRD1P21728 446 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 SULT1E1P49888 294 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 NME3Q13232 169 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 ZC3H12AQ5D1E8 599 aaKnown RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 DGKKQ5KSL6 1271 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 DNAJC24Q6P3W2 148 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 SND1Q7KZF4 910 aaKnown RBP eCLIP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 MON1BQ7L1V2 547 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 CCDC105Q8IYK2 499 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 CPXM2Q8N436 756 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 ATP6V0D2Q8N8Y2 350 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 OR8K1Q8NGG5 319 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 BHMTQ93088 406 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 CHFRQ96EP1 664 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 FCRL2Q96LA5 508 aaPredicted RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 SYT11Q9BT88 431 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 TMEM51Q9NW97 253 aa14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 KIF26AQ9ULI4 1882 aaPredicted RBP14.58□□□□□ -0.08
GTF3C3-206ENST00000448539 ANKRD62A6NC57 917 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 DDX3XO00571 662 aaKnown RBP eCLIP14.57□□□□□ -0.082e-7■■■■□ 24.5
GTF3C3-206ENST00000448539 AP5Z1O43299 807 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 ACSL4O60488 711 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 APODP05090 189 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 KRT3P12035 628 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 GZMAP12544 262 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TYRP14679 529 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 DESP17661 470 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 CCR1P32246 355 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 EIF2DP41214 584 aaKnown RBP14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 RPS9P46781 194 aaKnown RBP14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 NUBP1P53384 320 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PTPN5P54829 565 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 GSCP56915 257 aaPredicted RBP14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PITX1P78337 314 aaPredicted RBP14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TCF15Q12870 199 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 PTP4A2Q12974 167 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 MTA1Q13330 715 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
GTF3C3-206ENST00000448539 TMEM196Q5HYL7 178 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms