RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 SOX10P56693 466 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 BCAR1P56945 870 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 LRRC74AQ0VAA2 488 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 ITPRIPL1Q6GPH6 555 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 PALB2Q86YC2 1186 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 SETD9Q8NE22 299 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 USP13Q92995 863 aaPredicted RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 PWWP2AQ96N64 755 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 ATXN2Q99700 1313 aaKnown RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 DISP2A7MBM2 1401 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 ASMTLO95671 621 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 HNRNPH3P31942 346 aaKnown RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 MAGEA10P43363 369 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 PPP4CP60510 307 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 DGCR6Q14129 220 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 COBLL1Q53SF7 1204 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 OTUD3Q5T2D3 398 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 FRMD5Q7Z6J6 570 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 CASZ1Q86V15 1759 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 CDKL3Q8IVW4 592 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 TMEM35BQ8NCS4 154 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 PIK3C3Q8NEB9 887 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 SHCBP1Q8NEM2 672 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 ACER1Q8TDN7 264 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 CCDC17Q96LX7 622 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 ALS2Q96Q42 1657 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 TBC1D10AQ9BXI6 508 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 STK33Q9BYT3 514 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 COPS7BQ9H9Q2 264 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 ASNSD1Q9NWL6 643 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 NMRK1Q9NWW6 199 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 VPS4AQ9UN37 437 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 HEATR9A2RTY3 570 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 SYNCRIPO60506 623 aaKnown RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 WFS1O76024 890 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 PWP1Q13610 501 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 DDR2Q16832 855 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 BROXQ5VW32 411 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 PLA2G4FQ68DD2 849 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 CPA5Q8WXQ8 436 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 INPP4AQ96PE3 977 aaPredicted RBP9.46□□□□□ -0.9
SMC6-207ENST00000448223 NACC1Q96RE7 527 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 WRNIP1Q96S55 665 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 ADPGKQ9BRR6 497 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 CBWD1Q9BRT8 395 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 FSD1LQ9BXM9 530 aa9.46□□□□□ -0.9
SMC6-207ENST00000448223 ZC3H4Q9UPT8 1303 aaKnown RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 C5orf58C9J3I9 102 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 SKIV2L2P42285 1042 aaKnown RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 SLC1A1P43005 524 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 MAGEA2P43356 314 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 SESN2P58004 480 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 OSTNP61366 133 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 CBWD6Q4V339 395 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 CBWD3Q5JTY5 395 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 CBWD5Q5RIA9 395 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 EPB41L1Q9H4G0 881 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 PTTG2Q9NZH5 202 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 TUBGCP4Q9UGJ1 667 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 PDXKO00764 312 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 ANPEPP15144 967 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 STAT5AP42229 794 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 STAT5BP51692 787 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 RHBDL3P58872 404 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 POU5F1Q01860 360 aaKnown RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 SPIRE1Q08AE8 756 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 DHDDSQ86SQ9 333 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 FAM172AQ8WUF8 416 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 SLC35C1Q96A29 364 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 TTYH1Q9H313 450 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 NUP50Q9UKX7 468 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 TFECO14948 347 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 SIN3BO75182 1162 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 WARSP23381 471 aaKnown RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 CARTPTQ16568 116 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 NRF1Q16656 503 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 TXNDC11Q6PKC3 985 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 NET1Q7Z628 596 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 CPNE8Q86YQ8 564 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 OXNAD1Q96HP4 312 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 HES6Q96HZ4 224 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 AGPAT1Q99943 283 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 EGFL8Q99944 293 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 AJAP1Q9UKB5 411 aaPredicted RBP9.45□□□□□ -0.9
SMC6-207ENST00000448223 ZHX2Q9Y6X8 837 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 DCCP43146 1447 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 SNX3O60493 162 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 LDLRP01130 860 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 MMP10P09238 476 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 NPR3P17342 541 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 VAMP7P51809 220 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 MAPK7Q13164 816 aa9.45□□□□□ -0.9
SMC6-207ENST00000448223 ARSHQ5FYA8 562 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms