RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SRGAP2O75044 1071 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 HDCP19113 662 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 CCR1P32246 355 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 KPNA1P52294 538 aaPredicted RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 AIF1P55008 147 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 NTHL1P78549 312 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 AMPD2Q01433 879 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 TRIP4Q15650 581 aaPredicted RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 CYP4V2Q6ZWL3 525 aaPredicted RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 SHKBP1Q8TBC3 707 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 TEKT4Q8WW24 435 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 TCEAL4Q96EI5 215 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 SNRNP25Q9BV90 132 aaKnown RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 CARD9Q9H257 536 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 C2orf16Q68DN1 1984 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 ZRANB2O95218 330 aaKnown RBP eCLIP20.29■□□□□ 0.84
SGCE-207ENST00000447873 KRT1P04264 644 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 SLC2A3P11169 496 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 MBL2P11226 248 aaPredicted RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 ADRA1BP35368 520 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 PPP2R5DQ14738 602 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 ARHGAP15Q53QZ3 475 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 ZC3H12AQ5D1E8 599 aaKnown RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 BRMS1LQ5PSV4 323 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 MAB21L3Q8N8X9 362 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 EXD1Q8NHP7 514 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 NTAN1Q96AB6 310 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 PBKQ96KB5 322 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 CYP2S1Q96SQ9 504 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 APOL5Q9BWW9 433 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 TKTL2Q9H0I9 626 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.29■□□□□ 0.84
SGCE-207ENST00000447873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.29■□□□□ 0.84
SGCE-207ENST00000447873 AP4E1Q9UPM8 1137 aa20.29■□□□□ 0.84
SGCE-207ENST00000447873 HBS1LQ9Y450 684 aaKnown RBP20.29■□□□□ 0.84
SGCE-207ENST00000447873 HOXB8P17481 243 aaPredicted RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 PFKLP17858 780 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 COG7P83436 770 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 ZNF211Q13398 564 aaPredicted RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 TEAD2Q15562 447 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 SLC5A9Q2M3M2 681 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 EFHC2Q5JST6 749 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 PRSS36Q5K4E3 855 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 DCAF12L1Q5VU92 463 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 EP400NLQ6ZTU2 488 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 PSTKQ8IV42 348 aaKnown RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 CCDC50Q8IVM0 306 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 RCOR2Q8IZ40 523 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 ARL14EPQ8N8R7 260 aaPredicted RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 KCTD6Q8NC69 237 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 COG1Q8WTW3 980 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 RNF25Q96BH1 459 aaPredicted RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 SLC39A13Q96H72 371 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 RBM41Q96IZ5 413 aaKnown RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 GPATCH2LQ9NWQ4 482 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 CLDND1Q9NY35 253 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 FZD10Q9ULW2 581 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 MRPS23Q9Y3D9 190 aaKnown RBP20.28■□□□□ 0.84
SGCE-207ENST00000447873 REV3LO60673 3130 aa20.28■□□□□ 0.84
SGCE-207ENST00000447873 TRAV19A0A0A6YYK7 116 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 LRRD1A4D1F6 860 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 PI4K2BG5E9Z4 385 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 NRG2O14511 850 aaPredicted RBP20.27■□□□□ 0.84
SGCE-207ENST00000447873 OLFM2O95897 454 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 APOEP02649 317 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 CKMP06732 381 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 HMBSP08397 361 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 PYGMP11217 842 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 DDX6P26196 483 aaKnown RBP eCLIP20.27■□□□□ 0.84
SGCE-207ENST00000447873 STXBP5Q5T5C0 1151 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 GPR158Q5T848 1215 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 SEL1L2Q5TEA6 688 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 SYCE2Q6PIF2 218 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 GPR149Q86SP6 731 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 MICALL1Q8N3F8 863 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 RAPGEF5Q92565 580 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 FCRL2Q96LA5 508 aaPredicted RBP20.27■□□□□ 0.84
SGCE-207ENST00000447873 SLC22A12Q96S37 553 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 DHX35Q9H5Z1 703 aaKnown RBP20.27■□□□□ 0.84
SGCE-207ENST00000447873 TMPRSS4Q9NRS4 437 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 ARHGEF38Q9NXL2 777 aa20.27■□□□□ 0.84
SGCE-207ENST00000447873 CES2O00748 559 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 ZNF185O15231 689 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 CEP104O60308 925 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 MOSPD3O75425 235 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 RING1Q06587 406 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SCAPQ12770 1279 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 KRT81Q14533 505 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 CTC1Q2NKJ3 1217 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 CAPZA3Q96KX2 299 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SLC46A2Q9BY10 475 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SLITRK6Q9H5Y7 841 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 TASP1Q9H6P5 420 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SMPD4Q9NXE4 827 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SLC12A6Q9UHW9 1150 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 CDC23Q9UJX2 597 aa20.26■□□□□ 0.83
SGCE-207ENST00000447873 SOBPA7XYQ1 873 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms