RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 GJB6O95452 261 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 OLFM2O95897 454 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 FYNP06241 537 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 HMBSP08397 361 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SLC2A3P11169 496 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 PSMC3P17980 439 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 PSMA2P25787 234 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 FLT3P36888 993 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 NOP2P46087 812 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 HARS2P49590 506 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 ZNF143P52747 638 aaPredicted RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 PTPN5P54829 565 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 NAP1L1P55209 391 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 TBX4P57082 545 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 DEUP1Q05D60 604 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 KIF5AQ12840 1032 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 NME3Q13232 169 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 VITQ6UXI7 678 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 MFSD6LQ8IWD5 586 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 RHOT2Q8IXI1 618 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 JOSD2Q8TAC2 188 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SH3RF2Q8TEC5 729 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 USP13Q92995 863 aaPredicted RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 FAM122AQ96E09 287 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 TRMT61BQ9BVS5 477 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 PACSIN1Q9BY11 444 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 OBP2AQ9NY56 170 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 COX16Q9P0S2 106 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 CFAP97Q9P2B7 532 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 UVRAGQ9P2Y5 699 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
LINC00408-201ENST00000447784 HBS1LQ9Y450 684 aaKnown RBP12.07□□□□□ -0.48
LINC00408-201ENST00000447784 TCRBV5S1A1TA0A578 114 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 TMEM191CA6NGB0 347 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 C2CD4BA6NLJ0 364 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 HEPACAM2A8MVW5 462 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 MYO1FO00160 1098 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 LEFTY2O00292 366 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 ZNF263O14978 683 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 RNF8O76064 485 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 APOEP02649 317 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 CCDC175P0C221 793 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 IRF1P10914 325 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 RDXP35241 583 aaKnown RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 VIPR2P41587 438 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 VAV2P52735 878 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 RPL7AP62424 266 aaKnown RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 ATP11AP98196 1134 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 MTA1Q13330 715 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 MLF2Q15773 248 aaPredicted RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 TAC4Q86UU9 113 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 UNC45BQ8IWX7 931 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 ACRBPQ8NEB7 543 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 PRSS33Q8NF86 280 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 RFFLQ8WZ73 363 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 IRF7Q92985 503 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 PLD4Q96BZ4 506 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 NPY6RQ99463 290 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 NCAPGQ9BPX3 1015 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 CNPY3Q9BT09 278 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 KLF16Q9BXK1 252 aaPredicted RBP12.06□□□□□ -0.48
LINC00408-201ENST00000447784 DCLK3Q9C098 648 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 BRD9Q9H8M2 597 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 TBC1D17Q9HA65 648 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 GKN1Q9NS71 199 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 IP6K2Q9UHH9 426 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 ANAPC7Q9UJX3 599 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 TLR6Q9Y2C9 796 aa12.06□□□□□ -0.48
LINC00408-201ENST00000447784 NOTCH4Q99466 2003 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 KANSL1LA0AUZ9 987 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 STK25O00506 426 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SLC9A3R1O14745 358 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 MSI1O43347 362 aaKnown RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 PI15O43692 258 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 PRAMEF12O95522 483 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CCR1P32246 355 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SSR1P43307 286 aaKnown RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 PTPN9P43378 593 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SLC11A2P49281 568 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 MLLT6P55198 1093 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CCZ1BP86790 482 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CCZ1P86791 482 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 FCHO2Q0JRZ9 810 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 TCF15Q12870 199 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 NNTQ13423 1086 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms