RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PHACTR3Q96KR7 559 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 PIGSQ96S52 555 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 MYCBPQ99417 103 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 CD180Q99467 661 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 EIF3CQ99613 913 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 PIP5K1AQ99755 562 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 LBHD1Q9BQE6 289 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 HGH1Q9BTY7 390 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 APOL6Q9BWW8 343 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 TRIM5Q9C035 493 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 RNF32Q9H0A6 362 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 EPC1Q9H2F5 836 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SLC6A15Q9H2J7 730 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SYNPO2LQ9H987 977 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SEMA4BQ9NPR2 832 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 SLC35C2Q9NQQ7 365 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 ETAA1Q9NY74 926 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 EHD2Q9NZN4 543 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 CPSF2Q9P2I0 782 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ZNF70Q9UC06 446 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ADAMTS6Q9UKP5 1117 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 HDAC5Q9UQL6 1122 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 DRG1Q9Y295 367 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ENTPD2Q9Y5L3 495 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 LIPT2A6NK58 231 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 B5MCH6 92 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TAF4O00268 1085 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 MUSKO15146 869 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TGFB1I1O43294 461 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TBX10O75333 385 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 SEC14L2O76054 403 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CSPG5O95196 566 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ATP5BP06576 529 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 THEGLP0DJG4 465 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 RARGP13631 454 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CHN1P15882 459 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 SAT1P21673 171 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TBXAS1P24557 533 aaPredicted RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 PRKAR1BP31321 381 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 THBS4P35443 961 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PNPLA4P41247 253 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 GARSP41250 739 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 GSTM5P46439 218 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CPA2P48052 419 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 LMAN1P49257 510 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PDE6CP51160 858 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ZNF134P52741 427 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 RRADP55042 308 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 NPEPPSP55786 919 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PSMC6P62333 389 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ATP2C1P98194 919 aaPredicted RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 PIGFQ07326 219 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TFCP2Q12800 502 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 NAA25Q14CX7 972 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PKN2Q16513 984 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 PTCHD3Q3KNS1 767 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 MMEL1Q495T6 779 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 DNAJC21Q5F1R6 531 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 ZNF766Q5HY98 468 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TMEM154Q6P9G4 183 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 NCEH1Q6PIU2 408 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CLEC9AQ6UXN8 241 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 LDHDQ86WU2 507 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 RAB11FIP4Q86YS3 637 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ERC1Q8IUD2 1116 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 EPHX4Q8IUS5 362 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 KIAA2013Q8IYS2 634 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CCDC170Q8IYT3 715 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ADGRF2Q8IZF7 708 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 NAT8LQ8N9F0 302 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 POMGNT2Q8NAT1 580 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 SUN3Q8TAQ9 357 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ABHD4Q8TB40 342 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 SLC2A12Q8TD20 617 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 VPS33AQ96AX1 596 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PERPQ96FX8 193 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 INTS4Q96HW7 963 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 RPL10LQ96L21 214 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 FNBP1Q96RU3 617 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 WDR24Q96S15 920 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 GORASP1Q9BQQ3 440 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 HERC2P3Q9BVR0 1158 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ENKD1Q9H0I2 346 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 KAT14Q9H8E8 782 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 HCN3Q9P1Z3 774 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ANAPC5Q9UJX4 755 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 TMCC3Q9ULS5 477 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 CDYLQ9Y232 598 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 RCE1Q9Y256 329 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 ZBTB1Q9Y2K1 713 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 MRPS17Q9Y2R5 130 aaKnown RBP4.12□□□□□ -1.75
PMS1-216ENST00000447734 KNSTRNQ9Y448 316 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PCDHB7Q9Y5E2 793 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 RAD54BQ9Y620 910 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 PNPLA7Q6ZV29 1317 aa4.12□□□□□ -1.75
PMS1-216ENST00000447734 GOLGA6L10A0A0M3HER8 536 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 AGAP5A6NIR3 686 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms