RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 CNTNAP3Q9BZ76 1288 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 OSBPL6Q9BZF3 934 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 NUCKS1Q9H1E3 243 aaKnown RBP14.75□□□□□ -0.05
SREBF1-207ENST00000447641 POPDC2Q9HBU9 364 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 SFMBT1Q9UHJ3 866 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 STRIP2Q9ULQ0 834 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 NAALADL1Q9UQQ1 740 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 SH3BP1Q9Y3L3 701 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 HBS1LQ9Y450 684 aaKnown RBP14.75□□□□□ -0.05
SREBF1-207ENST00000447641 PIAS3Q9Y6X2 628 aa14.75□□□□□ -0.05
SREBF1-207ENST00000447641 KANSL1LA0AUZ9 987 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 SLC12A8A0AV02 714 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 IGLV3-25P01717 112 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 NCAM1P13591 858 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 MSNP26038 577 aaKnown RBP14.74□□□□□ -0.05
SREBF1-207ENST00000447641 ZBED6P86452 979 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 CENPCQ03188 943 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 NNTQ13423 1086 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 C1orf228Q6PIY5 440 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 RHBDF2Q6PJF5 856 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 ZNF852Q6ZMS4 543 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 TPRG1Q6ZUI0 275 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 XYLT1Q86Y38 959 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 PHF13Q86YI8 300 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-207ENST00000447641 BBS7Q8IWZ6 715 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 CPA6Q8N4T0 437 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 RUBCNQ92622 972 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 PLD4Q96BZ4 506 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 NELL2Q99435 816 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 RASAL2Q9UJF2 1139 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 SIT1Q9Y3P8 196 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 MTF2Q9Y483 593 aaPredicted RBP14.74□□□□□ -0.05
SREBF1-207ENST00000447641 WDFY3Q8IZQ1 3526 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 ACACBO00763 2458 aa14.74□□□□□ -0.05
SREBF1-207ENST00000447641 MAP1BP46821 2468 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 HSF2BPO75031 334 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 NFATC1O95644 943 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 CYP17A1P05093 508 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 IRF1P10914 325 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 CD72P21854 359 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 HNRNPH3P31942 346 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 GJA4P35212 333 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 SOX9P48436 509 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 KPNA1P52294 538 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 GSCP56915 257 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 RING1Q06587 406 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 ARID5BQ14865 1188 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 DHCR24Q15392 516 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 ASIC2Q16515 512 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 RSPO4Q2I0M5 234 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 HGSNATQ68CP4 663 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 OR6B2Q6IFH4 312 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 TXNDC11Q6PKC3 985 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 ARCQ7LC44 396 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 ZNF571Q7Z3V5 609 aaPredicted RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 FAM217AQ8IXS0 508 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 TTC16Q8NEE8 873 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 SLC30A5Q8TAD4 765 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 TTC8Q8TAM2 541 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 DQX1Q8TE96 717 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 IPO4Q8TEX9 1081 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 NT5C3BQ969T7 300 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 CLDN23Q96B33 292 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 FAM149B1Q96BN6 582 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 SLC39A13Q96H72 371 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 DCLK3Q9C098 648 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 LTB4R2Q9NPC1 389 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 STOML2Q9UJZ1 356 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 TMEM59LQ9UK28 342 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 AGO1Q9UL18 857 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 ZNF510Q9Y2H8 683 aa14.73□□□□□ -0.05
SREBF1-207ENST00000447641 LUC7L2Q9Y383 392 aaKnown RBP14.73□□□□□ -0.05
SREBF1-207ENST00000447641 GFRA2O00451 464 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 TRDMT1O14717 391 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 SCAMP3O14828 347 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 MSI1O43347 362 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 CORO1AP31146 461 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 NR1H3Q13133 447 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 ZC3H14Q6PJT7 736 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 MMS22LQ6ZRQ5 1243 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 DEFB106AQ8N104 65 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 MSANTD4Q8NCY6 345 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 FAM3CQ92520 227 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 AZIN2Q96A70 460 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 HINFPQ9BQA5 517 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 SYNCQ9H7C4 482 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 ZNHIT6Q9NWK9 470 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 LSM7Q9UK45 103 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 TLR6Q9Y2C9 796 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 MRPS17Q9Y2R5 130 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 BZW2Q9Y6E2 419 aaKnown RBP14.72□□□□□ -0.05
SREBF1-207ENST00000447641 LAMA1P25391 3075 aa14.72□□□□□ -0.05
SREBF1-207ENST00000447641 ASPMQ8IZT6 3477 aa14.71□□□□□ -0.05
SREBF1-207ENST00000447641 USP24Q9UPU5 2620 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms