RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DHCR24Q15392 516 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 RHBDF2Q6PJF5 856 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 TPRG1Q6ZUI0 275 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 TMEM25Q86YD3 366 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 VCPIP1Q96JH7 1222 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 CFAP57Q96MR6 1250 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 SERPINB11Q96P15 392 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 TBCBQ99426 244 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 COX16Q9P0S2 106 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 WDR35Q9P2L0 1181 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 TBC1D14Q9P2M4 693 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 XPO7Q9UIA9 1087 aaKnown RBP16.69■□□□□ 0.26
USP39-205ENST00000442708 LSM7Q9UK45 103 aaKnown RBP16.69■□□□□ 0.26
USP39-205ENST00000442708 PIAS3Q9Y6X2 628 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 SSU72P8A0A1W2PR75 194 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 C2CD4BA6NLJ0 364 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 SIGLEC16A6NMB1 481 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 SLC9A3R1O14745 358 aaPredicted RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 KRT3P12035 628 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 RPL7AP62424 266 aaKnown RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 RING1Q06587 406 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 NNTQ13423 1086 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 CCDC14Q49A88 953 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 ZC3H12AQ5D1E8 599 aaKnown RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 LY6G5CQ5SRR4 150 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 NADSYN1Q6IA69 706 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 ARCQ7LC44 396 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 FAM217AQ8IXS0 508 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 RXFP2Q8WXD0 754 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 OTUB2Q96DC9 234 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 FAM204AQ9H8W3 233 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 NHEJ1Q9H9Q4 299 aaPredicted RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 PIGVQ9NUD9 493 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 ZNHIT6Q9NWK9 470 aaKnown RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 MTF2Q9Y483 593 aaPredicted RBP16.68■□□□□ 0.26
USP39-205ENST00000442708 KIAA1549LQ6ZVL6 1849 aa16.68■□□□□ 0.26
USP39-205ENST00000442708 GOLGA6L7A0A1B0GV03 622 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 I6L893 689 aaPredicted RBP16.67■□□□□ 0.26
USP39-205ENST00000442708 M0QYT0 321 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 NFATC1O95644 943 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 CTHP32929 405 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 GJA4P35212 333 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SULT1E1P49888 294 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 KPNA1P52294 538 aaPredicted RBP16.67■□□□□ 0.26
USP39-205ENST00000442708 STARD6P59095 220 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 OGDHQ02218 1023 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 NME3Q13232 169 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 MAMLD1Q13495 774 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
USP39-205ENST00000442708 C15orf59Q2T9L4 293 aaPredicted RBP16.67■□□□□ 0.26
USP39-205ENST00000442708 SLC25A52Q3SY17 297 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 CCDC122Q5T0U0 273 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 PLEKHA7Q6IQ23 1121 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 PPP1R2P3Q6NXS1 205 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
USP39-205ENST00000442708 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 ZNF653Q96CK0 615 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 MYEOVQ96EZ4 313 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SELENOOQ9BVL4 669 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 THAP2Q9H0W7 228 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 TBC1D17Q9HA65 648 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 GRPEL1Q9HAV7 217 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 ANLNQ9NQW6 1124 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SPHK2Q9NRA0 654 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 SPTLC3Q9NUV7 552 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 F5P12259 2224 aa16.67■□□□□ 0.26
USP39-205ENST00000442708 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 GFRA2O00451 464 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 GLULP15104 373 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 ABCB4P21439 1286 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 FECHP22830 423 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 SLC6A4P31645 630 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 HARS2P49590 506 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 MLLT6P55198 1093 aaPredicted RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 PRKCQQ04759 706 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 MESP2Q0VG99 397 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 FAM133BQ5BKY9 247 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 CWF19L1Q69YN2 538 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 TPGS1Q6ZTW0 290 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 C12orf40Q86WS4 652 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 ARHGEF26Q96DR7 871 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 PGAP3Q96FM1 320 aaPredicted RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 MCEEQ96PE7 176 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 PANX2Q96RD6 677 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms