RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CSRP1P21291 193 aaKnown RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 PRCPP42785 496 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 SNX16P57768 344 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 BST2Q10589 180 aaKnown RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 CUL2Q13617 745 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 EIF4HQ15056 248 aaKnown RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 CCDC40Q4G0X9 1142 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 ZCWPW2Q504Y3 356 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 ZNF394Q53GI3 561 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 TPGS1Q6ZTW0 290 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 UNC45BQ8IWX7 931 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 SCML4Q8N228 414 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 MDGA1Q8NFP4 955 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 WFIKKN2Q8TEU8 576 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 IPO4Q8TEX9 1081 aaKnown RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 IRGQQ8WZA9 623 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 EZH1Q92800 747 aaPredicted RBP8.15□□□□□ -1.11
CD44-211ENST00000442151 JAKMIP2Q96AA8 810 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 NT5C1BQ96P26 610 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 FBRSQ9HAH7 460 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 CNGB3Q9NQW8 809 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 TMEM30AQ9NV96 361 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 TMEM51Q9NW97 253 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 ANGPTL2Q9UKU9 493 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 SLC6A14Q9UN76 642 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 ZDHHC9Q9Y397 364 aa8.15□□□□□ -1.11
CD44-211ENST00000442151 EP300Q09472 2414 aaPredicted RBP8.14□□□□□ -1.11
CD44-211ENST00000442151 DNAH14Q0VDD8 3507 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 SLC12A8A0AV02 714 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
CD44-211ENST00000442151 TM4SF5O14894 197 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 CYP26A1O43174 497 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 MED7O43513 233 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 STC2O76061 302 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 FBXO21O94952 628 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 ACADMP11310 421 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 CEACAM1P13688 526 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 TKTL1P51854 596 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 RAD23BP54727 409 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 RPL6Q02878 288 aaKnown RBP8.14□□□□□ -1.11
CD44-211ENST00000442151 GFPT1Q06210 699 aaPredicted RBP8.14□□□□□ -1.11
CD44-211ENST00000442151 EFEMP1Q12805 493 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 MTA1Q13330 715 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 ORC1Q13415 861 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 PM20D1Q6GTS8 502 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 ENOSF1Q7L5Y1 443 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 PIGZQ86VD9 579 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 MIB1Q86YT6 1006 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 PHTF2Q8N3S3 785 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 SLC4A11Q8NBS3 891 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 DDI1Q8WTU0 396 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 KCTD13Q8WZ19 329 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 HSFY1Q96LI6 401 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 GABRG3Q99928 467 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 ZDHHC5Q9C0B5 715 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 FBXO10Q9UK96 956 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 INVSQ9Y283 1065 aa8.14□□□□□ -1.11
CD44-211ENST00000442151 C4orf47A7E2U8 309 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 UPK3BL1B0FP48 263 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 UPK3BL2E5RIL1 263 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 DCLK1O15075 740 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 IRAK2O43187 625 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 KCNK5O95279 499 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 TBX18O95935 607 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 CORO1AP31146 461 aaKnown RBP8.13□□□□□ -1.11
CD44-211ENST00000442151 ACADSBP45954 432 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 SLC11A2P49281 568 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PNOCQ13519 176 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 CNGA2Q16280 664 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 MAP7D1Q3KQU3 841 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 TRIM61Q5EBN2 209 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 RAB41Q5JT25 222 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 EMC10Q5UCC4 262 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 NAIF1Q69YI7 327 aaPredicted RBP8.13□□□□□ -1.11
CD44-211ENST00000442151 ANKRD40Q6AI12 368 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 ANKS1BQ7Z6G8 1248 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 C12orf40Q86WS4 652 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 ZC3H3Q8IXZ2 948 aaKnown RBP8.13□□□□□ -1.11
CD44-211ENST00000442151 AZIN2Q96A70 460 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 TMA16Q96EY4 203 aaKnown RBP8.13□□□□□ -1.11
CD44-211ENST00000442151 TWNKQ96RR1 684 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PPP1R9BQ96SB3 815 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PCED1AQ9H1Q7 454 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 GOLPH3LQ9H4A5 285 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 NMUR1Q9HB89 426 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 SUN2Q9UH99 717 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PLA2G4CQ9UP65 541 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 MYH10P35580 1976 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 H0Y626 953 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 SMAPO00193 183 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 TRIM16O95361 564 aa8.13□□□□□ -1.11
CD44-211ENST00000442151 PENKP01210 267 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms