RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CASC4Q6P4E1 433 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 GPAMQ9HCL2 828 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 SPO11Q9Y5K1 396 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
DHFR-201ENST00000439211 SEC24DO94855 1032 aaPredicted RBP16.29■□□□□ 0.2
DHFR-201ENST00000439211 EEF1DP29692 281 aaKnown RBP16.29■□□□□ 0.2
DHFR-201ENST00000439211 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 CENPSQ8N2Z9 138 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 PPM1NQ8N819 430 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 FAM71DQ8N9W8 422 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 C12orf50Q8NA57 414 aaPredicted RBP16.29■□□□□ 0.2
DHFR-201ENST00000439211 ACTL9Q8TC94 416 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 CLEC4DQ8WXI8 215 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 DCUN1D1Q96GG9 259 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 MFSD14AQ96MC6 490 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 VPS51Q9UID3 782 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 MGEA5O60502 916 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 TCF4P15884 667 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 AQP5P55064 265 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 KRT72Q14CN4 511 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ANKDD1AQ495B1 522 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 TMC5Q6UXY8 1006 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 Q6ZNX1 250 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 EME1Q96AY2 570 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 RIPK3Q9Y572 518 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 PROCP04070 461 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 MYCLP1P12525 358 aaPredicted RBP16.28■□□□□ 0.2
DHFR-201ENST00000439211 NOMO3P69849 1222 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ZCCHC9Q8N567 271 aaKnown RBP16.28■□□□□ 0.2
DHFR-201ENST00000439211 PTCD3Q96EY7 689 aaKnown RBP16.28■□□□□ 0.2
DHFR-201ENST00000439211 SLC13A1Q9BZW2 595 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 MYPNQ86TC9 1320 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 KANSL1LA0AUZ9 987 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ZC3H11AO75152 810 aaKnown RBP eCLIP16.28■□□□□ 0.2
DHFR-201ENST00000439211 UNGP13051 313 aaPredicted RBP16.28■□□□□ 0.2
DHFR-201ENST00000439211 MAPK10P53779 464 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 MYL6P60660 151 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ZACNQ401N2 412 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 C6orf52Q5T4I8 152 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ZBTB8OSQ8IWT0 167 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 GIT1Q9Y2X7 761 aa16.28■□□□□ 0.2
DHFR-201ENST00000439211 ARIH1Q9Y4X5 557 aaPredicted RBP16.28■□□□□ 0.2
DHFR-201ENST00000439211 TOM1L1O75674 476 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 RAP1GDS1P52306 607 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 OLIG1Q8TAK6 271 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 ZNF516Q92618 1163 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 BTAF1O14981 1849 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 F5H423 210 aaPredicted RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 KCNA2P16389 499 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 MAP4P27816 1152 aaKnown RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 PTGER2P43116 358 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 ADAM17P78536 824 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 TFDP3Q5H9I0 405 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 SLC39A4Q6P5W5 647 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 KATNAL2Q8IYT4 538 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 DEFB107AQ8IZN7 70 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 STARD8Q92502 1023 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 JADE3Q92613 823 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 STRA6Q9BX79 667 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 LGALS13Q9UHV8 139 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 APOBEC2Q9Y235 224 aaKnown RBP16.27■□□□□ 0.2
DHFR-201ENST00000439211 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.2
DHFR-201ENST00000439211 CFAP99D6REC4 459 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 J3QRK9 145 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 WNT10BO00744 389 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 COPEO14579 308 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 MAGEB2O15479 319 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 LIASO43766 372 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 KLHL41O60662 606 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 FDX1P10109 184 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 ZNF12P17014 697 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 XIAPP98170 497 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 PERM1Q5SV97 790 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 ATG16L1Q676U5 607 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 RNF149Q8NC42 400 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 FBXO36Q8NEA4 188 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 FBXO27Q8NI29 283 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 AKT1S1Q96B36 256 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 PPWD1Q96BP3 646 aaKnown RBP16.27■□□□□ 0.19
DHFR-201ENST00000439211 FBXL8Q96CD0 374 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 FAF2Q96CS3 445 aa16.27■□□□□ 0.19
DHFR-201ENST00000439211 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.19
DHFR-201ENST00000439211 XPO7Q9UIA9 1087 aaKnown RBP16.27■□□□□ 0.19
DHFR-201ENST00000439211 GRAP2O75791 330 aa16.26■□□□□ 0.19
DHFR-201ENST00000439211 RBP3P10745 1247 aa16.26■□□□□ 0.19
DHFR-201ENST00000439211 COPAP53621 1224 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms