RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 C17orf75Q9HAS0 396 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 THAP1Q9NVV9 213 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 POLIQ9UNA4 740 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 FOCADQ5VW36 1801 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 XPOTO43592 962 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CCNT2O60583 730 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 OSBPP22059 807 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 HDAC4P56524 1084 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 NAA20P61599 178 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 MPP3Q13368 585 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 DCTN2Q13561 401 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 AAGABQ6PD74 315 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 BBS12Q6ZW61 710 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 USP37Q86T82 979 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 BHLHE22Q8NFJ8 381 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CISHQ9NSE2 258 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 EMCNQ9ULC0 261 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CCDC78A2IDD5 438 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 ATP9BO43861 1147 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 FGF3P11487 239 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 SAT1P21673 171 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 VARSP26640 1264 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 PRAMEP78395 509 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 FLOT2Q14254 428 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 TRIML2Q8N7C3 387 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 PRMT6Q96LA8 375 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 FBXL18Q96ME1 805 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CPXM1Q96SM3 734 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 COA1Q9GZY4 146 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 RBM38Q9H0Z9 239 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 PPCSQ9HAB8 311 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 PFDN4Q9NQP4 134 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 HES2Q9Y543 173 aa13.81□□□□□ -0.2
ACTN1-204ENST00000438964 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
ACTN1-204ENST00000438964 GSRP00390 522 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 COX4I1P13073 169 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 EPHA3P29320 983 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SESN2P58004 480 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 PDE1CQ14123 709 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 ANGEL2Q5VTE6 544 aaKnown RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 MBLAC2Q68D91 279 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 KBTBD6Q86V97 674 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 ZNF781Q8N8C0 355 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 NFASCO94856 1347 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 DNAH12Q6ZR08 3092 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 PDLIM1O00151 329 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 KLF11O14901 512 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SEC24DO94855 1032 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 KRT19P08727 400 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 PIGHQ14442 188 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 MAP3K21Q5TCX8 1036 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 PGM2L1Q6PCE3 622 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 MYO1HQ8N1T3 1032 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 TMA16Q96EY4 203 aaKnown RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 CCT7Q99832 543 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 METTL18O95568 372 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 APOEP02649 317 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 HMGCRP04035 888 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 CDH2P19022 906 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SERPINB8P50452 374 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
ACTN1-204ENST00000438964 WASHC5Q12768 1159 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 LPIN1Q14693 890 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 TMEM35BQ8NCS4 154 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 UBA3Q8TBC4 463 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 SORT1Q99523 831 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 TMEM216Q9P0N5 145 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 ZNF180Q9UJW8 692 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
ACTN1-204ENST00000438964 XIRP1Q702N8 1843 aaKnown RBP13.79□□□□□ -0.2
ACTN1-204ENST00000438964 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 NRAPQ86VF7 1730 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 NDC80O14777 642 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 PMM2O15305 246 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 KRT38O76015 456 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 ALDOAP04075 364 aaKnown RBP13.79□□□□□ -0.2
ACTN1-204ENST00000438964 PPP2R5DQ14738 602 aa13.79□□□□□ -0.2
ACTN1-204ENST00000438964 DLG2Q15700 870 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms