RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FAM47CQ5HY64 1035 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATPAF1Q5TC12 328 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 MBNL2Q5VZF2 373 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TPGS2Q68CL5 300 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ESRP1Q6NXG1 681 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 MEX3BQ6ZN04 569 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARHGAP36Q6ZRI8 547 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 Q6ZRM9 215 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 H1FNTQ75WM6 255 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPLX4Q7Z7G2 160 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 GPR149Q86SP6 731 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 GSPT2Q8IYD1 628 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADSSL1Q8N142 457 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SCML4Q8N228 414 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 DENND6BQ8NEG7 585 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC148Q8NFR7 591 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 OR1N1Q8NGS0 311 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RNF139Q8WU17 664 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RGMAQ96B86 450 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 EAF2Q96CJ1 260 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 EID2BQ96D98 161 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RNF125Q96EQ8 232 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RBM14Q96PK6 669 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 USP44Q9H0E7 712 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 MROH8Q9H579 483 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 AGO3Q9H9G7 860 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 BRF2Q9HAW0 419 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF304Q9HCX3 659 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TOMM22Q9NS69 142 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TM7SF3Q9NS93 570 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 CATSPERZQ9NTU4 200 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 DDX18Q9NVP1 670 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 UCKL1Q9NWZ5 548 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 STK32BQ9NY57 414 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TAS2R3Q9NYW6 316 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 AKAP7Q9P0M2 348 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ACTR3BQ9P1U1 418 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPNE7Q9UBL6 633 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 CACNG4Q9UBN1 327 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 Q9UFV3 132 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTBP2Q9UKA9 531 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 EXOC7Q9UPT5 735 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 LMTK3Q96Q04 1460 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CYP2D7A0A087X1C5 515 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC78A2IDD5 438 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 HMX3A6NHT5 357 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC169A6NNP5 214 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTGES3LE9PB15 166 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 KIF2AO00139 706 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SGK1O00141 431 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TAF4O00268 1085 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 KCNK3O14649 394 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 PIP5K1BO14986 540 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 OLFM2O95897 454 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 PAHP00439 452 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FTLP02792 175 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TK1P04183 234 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CLEC3BP05452 202 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 KITP10721 976 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FERP16591 822 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 RXRAP19793 462 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CD9P21926 228 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 AKT1P31749 480 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 RFC1P35251 1148 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TCF7P36402 384 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARL3P36405 182 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 EIF2DP41214 584 aaKnown RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 MATR3P43243 847 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC5A3P53794 718 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SUMO3P55854 103 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 NKX6-1P78426 367 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 BEX3Q00994 111 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 GALNT2Q10471 571 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBCCQ15814 346 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 GEN1Q17RS7 908 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FSTL4Q6MZW2 842 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARHGAP11AQ6P4F7 1023 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 LRSAM1Q6UWE0 723 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 OLFM4Q6UX06 510 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 RGS9BPQ6ZS82 235 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARMC8Q8IUR7 673 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SPATA2LQ8IUW3 424 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 DIS3L2Q8IYB7 885 aaKnown RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TAGAPQ8N103 731 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 LRRC43Q8N309 656 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 DCLK2Q8N568 766 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 C10orf53Q8N6V4 93 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ANKRD20A12PQ8NF67 263 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 DEPDC1BQ8WUY9 529 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBC1D5Q92609 795 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 HAS1Q92839 578 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATP6V0A1Q93050 837 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FBXW5Q969U6 566 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 LRRC59Q96AG4 307 aaKnown RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 VPS33AQ96AX1 596 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 COG3Q96JB2 828 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM81BQ96LP2 452 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 LENG8Q96PV6 779 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms