RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 C11orf63Q6NUN7 778 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 DCUN1D2Q6PH85 259 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SPATA31D4Q6ZUB0 917 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 HFE2Q6ZVN8 426 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC26A9Q7LBE3 791 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ARCQ7LC44 396 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SCD5Q86SK9 330 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 DAAM2Q86T65 1068 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 NT5DC3Q86UY8 548 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 NUP93Q8N1F7 819 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SIX6OS1Q8N1H7 587 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ARFGAP1Q8N6T3 406 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 MICAL1Q8TDZ2 1067 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 RXFP2Q8WXD0 754 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ARNTL2Q8WYA1 636 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 IRGQQ8WZA9 623 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SPATA17Q96L03 361 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ALS2CR12Q96Q35 445 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 EMILIN2Q9BXX0 1053 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 CHRDQ9H2X0 955 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC28A3Q9HAS3 691 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 CYP4F11Q9HBI6 524 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 NGRNQ9NPE2 291 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ENTPD7Q9NQZ7 604 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ASNSD1Q9NWL6 643 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 IP6K2Q9UHH9 426 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 GGT7Q9UJ14 662 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 MAFFQ9ULX9 164 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ALG6Q9Y672 507 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TRIP11Q15643 1979 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 TDRD15B5MCY1 1934 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 FAM92AA1XBS5 289 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC38A8A6NNN8 435 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 KIF2AO00139 706 aaPredicted RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 RFXAPO00287 272 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 ENC1O14682 589 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 HSF2BPO75031 334 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CLASP2O75122 1294 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 GLI1P08151 1106 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 PDGFRAP16234 1089 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 HMGA1P17096 107 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 TFE3P19532 575 aaPredicted RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 GPD1P21695 349 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 KLRC2P26717 231 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 GRNP28799 593 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CASQ1P31415 396 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 MAN1A1P33908 653 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CA8P35219 290 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CLCN4P51793 760 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 TAS2R40P59535 323 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 YWHAZP63104 245 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 RACK1P63244 317 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SMAD3P84022 425 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 MMRN1Q13201 1228 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 PIGHQ14442 188 aaPredicted RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 RAB6CQ53S08 254 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 C6orf118Q5T5N4 469 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 DAB2IPQ5VWQ8 1189 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SYPL2Q5VXT5 272 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 BSPRYQ5W0U4 402 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 PAPD7Q5XG87 772 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 DENND5BQ6ZUT9 1274 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SYCE1Q8N0S2 351 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 DEFB106AQ8N104 65 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 PGBD3Q8N328 593 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 NIPA2Q8N8Q9 360 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 FNIP1Q8TF40 1166 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC22A17Q8WUG5 538 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CD101Q93033 1021 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 TIFAQ96CG3 184 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 HES6Q96HZ4 224 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CEP295NLQ96MC4 621 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CFAP57Q96MR6 1250 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC2A13Q96QE2 648 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 DDX23Q9BUQ8 820 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 TLR10Q9BXR5 811 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 RAB6CQ9H0N0 254 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 NMUR1Q9HB89 426 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 COMMD8Q9NX08 183 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 OSER1Q9NX31 292 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 CALCOCO1Q9P1Z2 691 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 PACSIN2Q9UNF0 486 aaPredicted RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 NAALADL1Q9UQQ1 740 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 SCML2Q9UQR0 700 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 DYRK1BQ9Y463 629 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 JRKLQ9Y4A0 524 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 YIPF1Q9Y548 306 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 INSL5Q9Y5Q6 135 aa7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 MKI67P46013 3256 aaKnown RBP7.35□□□□□ -1.23
LSM3P3-201ENST00000436601 A0A1W2PQH9 124 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 CTAGE9A4FU28 777 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PRRG1O14668 218 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 PER2O15055 1255 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 DDX3YO15523 660 aaKnown RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 LPXNO60711 386 aa7.34□□□□□ -1.23
LSM3P3-201ENST00000436601 DAB1O75553 588 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms