RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NACA2Q9H009 215 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 DZANK1Q9NVP4 752 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 HELZP42694 1942 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 CCDC195A0A1B0GUA6 201 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 PI4K2BG5E9Z4 385 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 COCHO43405 550 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 MYL4P12829 197 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 ARSEP51690 589 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 TBX4P57082 545 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 RBM10P98175 930 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 PDK2Q15119 407 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 TRIP4Q15650 581 aaPredicted RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 DPYSL2Q16555 572 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 ZC3H12AQ5D1E8 599 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 ZNF697Q5TEC3 545 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 VN1R2Q8NFZ6 395 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 SLC39A13Q96H72 371 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 TKTL2Q9H0I9 626 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 SFXN1Q9H9B4 322 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 HCFC1R1Q9NWW0 138 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 ARHGEF38Q9NXL2 777 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 DNMT3BQ9UBC3 853 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 PGRMC1O00264 195 aaKnown RBP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 SLC2A3P11169 496 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 GTF2F1P35269 517 aaKnown RBP eCLIP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 CDH6P55285 790 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 TCEAL5Q5H9L2 206 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 EFHC2Q5JST6 749 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 MFSD7Q6UXD7 560 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 TMEM184AQ6ZMB5 413 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 SPOCD1Q6ZMY3 1216 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 MIB1Q86YT6 1006 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 MAP7D3Q8IWC1 876 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 FAM71BQ8TC56 605 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 ZNF707Q96C28 371 aaPredicted RBP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 TTYH1Q9H313 450 aaPredicted RBP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 ATXN3LQ9H3M9 355 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 PRDM12Q9H4Q4 367 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 DHX35Q9H5Z1 703 aaKnown RBP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 IGFLR1Q9H665 355 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 GPATCH2LQ9NWQ4 482 aa23.89■■□□□ 1.41
CPSF4-204ENST00000436336 HBS1LQ9Y450 684 aaKnown RBP23.89■■□□□ 1.41
CPSF4-204ENST00000436336 C2orf78A6NCI8 922 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 C3orf70A6NLC5 250 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-204ENST00000436336 PTPN7P35236 360 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 RING1Q06587 406 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 HYAL1Q12794 435 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 KRT81Q14533 505 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 CA9Q16790 459 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 PDZD4Q76G19 769 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-204ENST00000436336 VSIG1Q86XK7 387 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 EFHBQ8N7U6 833 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 CEP112Q8N8E3 955 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 FCRL2Q96LA5 508 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-204ENST00000436336 NAP1L3Q99457 506 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-204ENST00000436336 CDH23Q9H251 3354 aa23.88■■□□□ 1.41
CPSF4-204ENST00000436336 SLC12A8A0AV02 714 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 FGGP02679 453 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 RHOP08100 348 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 PFKLP17858 780 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 CDKN2BP42772 138 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 PPP2R5EQ16537 467 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 TFDP3Q5H9I0 405 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 OSBPL8Q9BZF1 889 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 PCDH18Q9HCL0 1135 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 ANLNQ9NQW6 1124 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 A0A1W2PRU2 124 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 PDE2AO00408 941 aaPredicted RBP23.87■■□□□ 1.41
CPSF4-204ENST00000436336 OLFM2O95897 454 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 IGLV3-27P01718 113 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 SRGAP2BP0DMP2 458 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 L1CAMP32004 1257 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 CYP4F8P98187 520 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 TAZQ16635 292 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 LONRF2Q1L5Z9 754 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 SLC13A5Q86YT5 568 aaPredicted RBP23.87■■□□□ 1.41
CPSF4-204ENST00000436336 CALN1Q9BXU9 219 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 RNF38Q9H0F5 515 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 TRPC7Q9HCX4 862 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 TMPRSS4Q9NRS4 437 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 MTMR10Q9NXD2 777 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 EFR3BQ9Y2G0 817 aa23.87■■□□□ 1.41
CPSF4-204ENST00000436336 KCNU1A8MYU2 1149 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 I6L893 689 aaPredicted RBP23.86■■□□□ 1.41
CPSF4-204ENST00000436336 APOEP02649 317 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 CD48P09326 243 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 COG7P83436 770 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 DPYSL3Q14195 570 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 TXNDC8Q6A555 127 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 ZNF572Q7Z3I7 529 aaPredicted RBP23.86■■□□□ 1.41
CPSF4-204ENST00000436336 ANKS1BQ7Z6G8 1248 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 SMG7Q92540 1137 aaKnown RBP23.86■■□□□ 1.41
CPSF4-204ENST00000436336 HAPLN3Q96S86 360 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 KCTD15Q96SI1 283 aaPredicted RBP23.86■■□□□ 1.41
CPSF4-204ENST00000436336 ZNF670Q9BS34 389 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 CARD6Q9BX69 1037 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 PIDD1Q9HB75 910 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 SMARCAL1Q9NZC9 954 aa23.86■■□□□ 1.41
CPSF4-204ENST00000436336 hCG_1818297A0A087WSY0 165 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms