RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 ZMIZ2Q8NF64 920 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 IPO4Q8TEX9 1081 aaKnown RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 TMEM174Q8WUU8 243 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 ERLEC1Q96DZ1 483 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 HSPA12BQ96MM6 686 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 IPO9Q96P70 1041 aaKnown RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 TSG101Q99816 390 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 SCAND2PQ9GZW5 306 aaPredicted RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 FAM124BQ9H5Z6 455 aaPredicted RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 TMEM8AQ9HCN3 771 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS50-203ENST00000436177 TOR4AQ9NXH8 423 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 CACNA2D2Q9NY47 1150 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 CLIC5Q9NZA1 410 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 GMPR2Q9P2T1 348 aaKnown RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 MBD1Q9UIS9 605 aaPredicted RBP8.15□□□□□ -1.1
VPS50-203ENST00000436177 MAPK8IP1Q9UQF2 711 aa8.15□□□□□ -1.1
VPS50-203ENST00000436177 DENND4CQ5VZ89 1909 aa8.15□□□□□ -1.11
VPS50-203ENST00000436177 ATRXP46100 2492 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 HELZP42694 1942 aaKnown RBP8.14□□□□□ -1.11
VPS50-203ENST00000436177 TMEM8BA6NDV4 472 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 GOLGA6L4A6NEF3 574 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 ANTXRLA6NF34 631 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 GFRA2O00451 464 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 NPC1O15118 1278 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 MDM4O15151 490 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 TRIM24O15164 1050 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 CETN3O15182 167 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 GPR37O15354 613 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 STC2O76061 302 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 BEST1O76090 585 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PROS1P07225 676 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 SERPINF2P08697 491 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 ACADMP11310 421 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 CORO1AP31146 461 aaKnown RBP8.14□□□□□ -1.11
VPS50-203ENST00000436177 NDUFA8P51970 172 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 KIF11P52732 1056 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 YWHAEP62258 255 aaKnown RBP8.14□□□□□ -1.11
VPS50-203ENST00000436177 ZNF33AQ06730 810 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 ENPEPQ07075 957 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PKP1Q13835 747 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PLEKHG6Q3KR16 790 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 DCAF17Q5H9S7 520 aaPredicted RBP8.14□□□□□ -1.11
VPS50-203ENST00000436177 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 ANKS1BQ7Z6G8 1248 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 GUF1Q8N442 669 aaKnown RBP8.14□□□□□ -1.11
VPS50-203ENST00000436177 DEFB119Q8N690 84 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 FRMD1Q8N878 549 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 TRIML1Q8N9V2 468 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 FBXL13Q8NEE6 735 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 RNF139Q8WU17 664 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 TWNKQ96RR1 684 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 DUSP16Q9BY84 665 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 CIPCQ9C0C6 399 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 NMUR1Q9HB89 426 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 RMND1Q9NWS8 449 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PLK2Q9NYY3 685 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 MARCH2Q9P0N8 246 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 HESX1Q9UBX0 185 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PILRBQ9UKJ0 227 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 STARD13Q9Y3M8 1113 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 LAMA1P25391 3075 aa8.14□□□□□ -1.11
VPS50-203ENST00000436177 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 IGHV1OR15-9A0A0B4J2B8 117 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 A0A1W2PQD8 194 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 A0A1W2PQF6 199 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 TTC24A2A3L6 582 aaPredicted RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 H0Y626 953 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 CDX4O14627 284 aaPredicted RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 TRIM16O95361 564 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 CD19P15391 556 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 CD6P30203 668 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 GCGRP47871 477 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 HARS2P49590 506 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 PGFP49763 221 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 ZNF132P52740 706 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 BCAT1P54687 386 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 YWHAGP61981 247 aaKnown RBP eCLIP8.13□□□□□ -1.11
VPS50-203ENST00000436177 PPP3CAQ08209 521 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 HNRNPDQ14103 355 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 EIF4HQ15056 248 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 NFIL3Q16649 462 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 EDRF1Q3B7T1 1238 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 SERPINA13PQ6UXR4 307 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 KRBA2Q6ZNG9 492 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 TOGARAM2Q6ZUX3 1019 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 DENND1CQ8IV53 801 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 ABCA7Q8IZY2 2146 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 SIX6OS1Q8N1H7 587 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms