RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 F2P00734 622 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 PDGFRBP09619 1106 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 CCDC130P13994 396 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 BGNP21810 368 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 SULT1E1P49888 294 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 GBE1Q04446 702 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 ZBTB16Q05516 673 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 MTM1Q13496 603 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 ANKRD20A3Q5VUR7 823 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 NCBP2-AS2Q69YL0 99 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 ZNF449Q6P9G9 518 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 ACMSDQ8TDX5 336 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 DEPDC1BQ8WUY9 529 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 CDKL2Q92772 493 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 E2F7Q96AV8 911 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 STAMBPL1Q96FJ0 436 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 SPATA13Q96N96 652 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 MYCBPQ99417 103 aaPredicted RBP10.77□□□□□ -0.68
CD44-210ENST00000434472 OSMRQ99650 979 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.68
CD44-210ENST00000434472 NAT9Q9BTE0 207 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 TMEM120AQ9BXJ8 343 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 MTMR10Q9NXD2 777 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 KCNK4Q9NYG8 393 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 HEY2Q9UBP5 337 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 DCTN4Q9UJW0 460 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 STAP1Q9ULZ2 295 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 GINS2Q9Y248 185 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 C15orf41Q9Y2V0 281 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 RAD54BQ9Y620 910 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 A0A0G2JND7 137 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PPP1R12AO14974 1030 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 DYNC1LI2O43237 492 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 OPHN1O60890 802 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 RFPL1O75677 317 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PIAS1O75925 651 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ALDH1A2O94788 518 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 AMPD1P23109 780 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CRHR1P34998 444 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 NOS2P35228 1153 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CCNG1P51959 295 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 AIF1P55008 147 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 OVGP1Q12889 678 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SLC10A2Q12908 348 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 MFSD10Q14728 455 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PDK1Q15118 436 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 GLRA4Q5JXX5 417 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ANKRD20A2Q5SQ80 823 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SYCP2LQ5T4T6 812 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ANKRD20A1Q5TYW2 823 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 TLDC1Q6P9B6 456 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 LRRC8BQ6P9F7 803 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PDZD4Q76G19 769 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 MARK2Q7KZI7 788 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 ADGRF2Q8IZF7 708 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 NME8Q8N427 588 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SLC2A14Q8TDB8 520 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PTPRN2Q92932 1015 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 MS4A4AQ96JQ5 239 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 OLFM3Q96PB7 478 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 TBC1D10AQ9BXI6 508 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 DUSP16Q9BY84 665 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 DTLQ9NZJ0 730 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PIN4Q9Y237 131 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SDR42E2A6NKP2 422 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 A8MUI8 341 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CXorf49A8MYA2 514 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 FBXO21O94952 628 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 TFE3P19532 575 aaPredicted RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 CALB2P22676 271 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ELF1P32519 619 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 GLUD2P49448 558 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 ZNF534Q76KX8 674 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 NUDCD3Q8IVD9 361 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 DEFB106AQ8N104 65 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ARHGAP24Q8N264 748 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CLEC4CQ8WTT0 213 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 BRI3BPQ8WY22 251 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SIKE1Q9BRV8 207 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 BTBD10Q9BSF8 475 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CXCL16Q9H2A7 254 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 C12orf65Q9H3J6 166 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms