RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 FBXO6Q9NRD1 293 aaPredicted RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 TAGLN3Q9UI15 199 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 LRCH1Q9Y2L9 728 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 KAT6AQ92794 2004 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 A0A0A0MRY4 1105 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 PEX10O60683 326 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 OPHN1O60890 802 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 GLRA3O75311 464 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 PIAS1O75925 651 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 STK10O94804 968 aaKnown RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 PSMG1O95456 288 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CSH1P0DML2 217 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CSH2P0DML3 217 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 NIPAL4Q0D2K0 466 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CA9Q16790 459 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 KHDC1Q4VXA5 237 aaKnown RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 HEATR6Q6AI08 1181 aaKnown RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 IRGCQ6NXR0 463 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 LRRC8BQ6P9F7 803 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 BEST2Q8NFU1 509 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 STMN2Q93045 179 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CPB2Q96IY4 423 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 SNX27Q96L92 541 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 SPATA13Q96N96 652 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 NMUR2Q9GZQ4 415 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ALG13Q9NP73 1137 aaKnown RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 AP4E1Q9UPM8 1137 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 HBS1LQ9Y450 684 aaKnown RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 USP3Q9Y6I4 520 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CHI3L2Q15782 390 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 RAB6CQ53S08 254 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ACSBG2Q5FVE4 666 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 C6orf163Q5TEZ5 329 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 DSTYKQ6XUX3 929 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 RINLQ6ZS11 566 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ZNF467Q7Z7K2 595 aaPredicted RBP14.11□□□□□ -0.15
COL6A3-207ENST00000433762 NDUFAF2Q8N183 169 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ARMC2Q8NEN0 867 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 CSPG4P5Q96PW8 444 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 RAB6CQ9H0N0 254 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 GPAMQ9HCL2 828 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 TXNRD2Q9NNW7 524 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 GPATCH2LQ9NWQ4 482 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 MTMR10Q9NXD2 777 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 ZFATQ9P243 1243 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 DCDC2Q9UHG0 476 aa14.11□□□□□ -0.15
COL6A3-207ENST00000433762 FAM237BA0A1B0GVD1 139 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 HMX2A2RU54 273 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 METTL18O95568 372 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 SKIP12755 728 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 AOC1P19801 751 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ABL2P42684 1182 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 GLUD2P49448 558 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 RGS7P49802 495 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 STX3Q13277 289 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 CCDC6Q16204 474 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 EFHC1Q5JVL4 640 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 CAPRIN2Q6IMN6 1127 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 RFWD3Q6PCD5 774 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 KCNT2Q6UVM3 1135 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 DEPDC1BQ8WUY9 529 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 TFB1MQ8WVM0 346 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 HTR3CQ8WXA8 447 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ANGPTL2Q9UKU9 493 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 RAD54BQ9Y620 910 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 SDR42E2A6NKP2 422 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 SPECC1L-ADORA2AF8WAN1 911 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 GRAP2O75791 330 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 TM7SF2O76062 418 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 FAM163BP0C2L3 166 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 PGAM1P18669 254 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 GRK2P25098 689 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 PGM1P36871 562 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ARL4AP40617 200 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 AP1B1Q10567 949 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 TAPT1Q6NXT6 567 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ACOT1Q86TX2 421 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ARID3BQ8IVW6 561 aaPredicted RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 WDR75Q8IWA0 830 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 C12orf29Q8N999 325 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 DCPSQ96C86 337 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 MRPL45Q9BRJ2 306 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 CCDC106Q9BWC9 280 aa14.1□□□□□ -0.15
COL6A3-207ENST00000433762 ADARB2Q9NS39 739 aaKnown RBP14.1□□□□□ -0.15
COL6A3-207ENST00000433762 CD4P01730 458 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PNPLA4P41247 253 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 AIF1P55008 147 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 KLC1Q07866 573 aa14.09□□□□□ -0.15
COL6A3-207ENST00000433762 SLC10A2Q12908 348 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-207ENST00000433762 PRKG1Q13976 671 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms