RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ERVK-8P63133 956 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TMEM259Q4ZIN3 620 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 FAM69AQ5T7M9 428 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SHEQ5VZ18 495 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 NAA35Q5VZE5 725 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 RAET1GQ6H3X3 334 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 LAYNQ6UX15 382 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ANKS1BQ7Z6G8 1248 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 CAMK1DQ8IU85 385 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SNX29Q8TEQ0 813 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 HPS1Q92902 700 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 STK33Q9BYT3 514 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PRRG3Q9BZD7 231 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 GPRC5BQ9NZH0 403 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 STK17AQ9UEE5 414 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 DCDC2Q9UHG0 476 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 KLHL20Q9Y2M5 609 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 NR2E1Q9Y466 385 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 EIF4G3O43432 1585 aaKnown RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 METTL21EPA6NDL7 271 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 URADA6NGE7 173 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ATMINO43313 823 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 MED24O75448 989 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 NDUFS3O75489 264 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 FAM13AO94988 1023 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 GNA14O95837 355 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PNPP00491 289 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ANXA6P08133 673 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 MLNP12872 115 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 OSBPP22059 807 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SLC7A2P52569 658 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 STX1BP61266 288 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SULT6B1Q6IMI4 303 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 KIF2BQ8N4N8 673 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 LPCAT1Q8NF37 534 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 BTN2A2Q8WVV5 523 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 NELFBQ8WX92 580 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 STMN2Q93045 179 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PHKBQ93100 1093 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ZIM3Q96PE6 472 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TMEM79Q9BSE2 394 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ARMC7Q9H6L4 198 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 RCOR1Q9UKL0 485 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 RAD54BQ9Y620 910 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PIAS3Q9Y6X2 628 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 MAP3K19Q56UN5 1328 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 WWP2O00308 870 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ARHGAP33O14559 1287 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 FZD6O60353 706 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 KRT1P04264 644 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 FCER2P06734 321 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SP100P23497 879 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 CHRNA5P30532 468 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 GGCXP38435 758 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 STAT5AP42229 794 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 NT5C2P49902 561 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TNNC1P63316 161 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 USP10Q14694 798 aaKnown RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TMEM132BQ14DG7 1078 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 CNGA2Q16280 664 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TRIM16LQ309B1 348 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PAGE2BQ5JRK9 111 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 C6orf89Q6UWU4 347 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 GPR142Q7Z601 462 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 MICU3Q86XE3 530 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 LSMEM2Q8N112 164 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 OR52K1Q8NGK4 314 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 SNX19Q92543 992 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 HDAC10Q969S8 669 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 INTS4Q96HW7 963 aaKnown RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 MAGED4Q96JG8 741 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 PPP1R10Q96QC0 940 aaKnown RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 HGH1Q9BTY7 390 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TARS2Q9BW92 718 aaKnown RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ACTR6Q9GZN1 396 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ANKRD2Q9GZV1 360 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 RIMS4Q9H426 269 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF275Q9NSD4 429 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-203ENST00000430976 IL37Q9NZH6 218 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 DNAJB9Q9UBS3 223 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 VPS9D1Q9Y2B5 631 aa5.52□□□□□ -1.53
PTPN4-203ENST00000430976 TNIKQ9UKE5 1360 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CLASP1Q7Z460 1538 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 A0A1W2PRG6 482 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 DIRAS3O95661 229 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 HMGN1P05114 100 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 IL1R1P14778 569 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GALP22466 123 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NR4A1P22736 598 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 PSMA2P25787 234 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NCOA4Q13772 614 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 RAB33AQ14088 237 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ELOAQ14241 798 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 EPHA7Q15375 998 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TSC22D1Q15714 1073 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 LRRC24Q50LG9 513 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 SEZ6L2Q6UXD5 910 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 RHPN2Q8IUC4 686 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms